Bacteria foraging optimization for protein sequence analysis on the grid. - K. Vivekanandan; D. Ramyachitra (Future Gener. Comput. Syst., 2012)

Multiple sequence alignment using multi-objective based bacterial foraging optimization algorithm. - R. Ranjani Rani; D. Ramyachitra (Biosyst., 2016)

Frog leap algorithm for homology modelling in grid environment. - D. Ramyachitra; P. Pradeep Kumar (Int. J. Grid Util. Comput., 2016)

An Improved Prorank Algorithm for Detection of Overlapping Protein Complexes using Protein Interaction and Gene Expression Datasets in Yeast. - P. Manikandan; D. Ramyachitra (ICIS, 2018)

Modified Genetic Algorithm (MGA) based feature selection with Mean Weighted Least Squares Twin Support Vector Machine (MW-LSTSVM) approach for vegetation classification. - V. Shenbaga Priya; D. Ramyachitra (Clust. Comput., 2019)

Antlion optimization algorithm for pairwise structural alignment with bi-objective functions. - R. Ranjani Rani; D. Ramyachitra (Neural Comput. Appl., 2020)

An Improved Genetic with Particle Swarm Optimization Algorithm Based on Ensemble Classification to Predict Protein-Protein Interaction. - P. Lakshmi; D. Ramyachitra (Wirel. Pers. Commun., 2020)

Multiple Kernel Based Remote Sensing Vegetation Classifier with Levy Optimized Subspace. - V. Shenbaga Priya; D. Ramyachitra (Wirel. Pers. Commun., 2020)

Improved Firefly Optimization for Pairwise Network Alignment with its Biological Significance of Predicting GO Functions and KEGG Pathways. - R. Ranjani Rani; D. Ramyachitra (Wirel. Pers. Commun., 2021)

A Modified Borderline Smote with Noise Reduction in Imbalanced Datasets. - M. Revathi; D. Ramyachitra (Wirel. Pers. Commun., 2021)

Protein remote homology recognition using local and global structural sequence alignment. - Sajithra Nakshathram; Ramyachitra Duraisamy (J. Intell. Fuzzy Syst., 2023)

Sequence-Order Frequency Matrix-Sampling and Machine Learning with Smith-Waterman (SOFM-SMSW) for Protein Remote Homology Detection. - Sajithra Nakshathram; Ramyachitra Duraisamy; P. Manikandan (Wirel. Pers. Commun., 2024)

An Improved Bagging of Machine Learning Algorithms to Predict Motif Structures From Protein-Protein Interaction Networks. - P. Lakshmi; P. Manikandan; D. Ramyachitra (IEEE Access, 2025)