Effects of replacing the unreliable cDNA microarray measurements on the disease classification based on gene expression profiles and functional modules. - Dong Wang 011; Yingli Lv; Zheng Guo 002; Xia Li 004; Yanhui Li; Jing Zhu 004; Da Yang 003; Jianzhen Xu; Chenguang Wang 004; Shaoqi Rao; Baofeng Yang (Bioinform., 2006)

Edge-based scoring and searching method for identifying condition-responsive protein-protein interaction sub-network. - Zheng Guo 002; Yongjin Li; Xue Gong; Chen Yao; Wencai Ma; Dong Wang 011; Yanhui Li; Jing Zhu 004; Min Zhang 009; Da Yang 003; Jing Wang 004 (Bioinform., 2007)

Gaining confidence in biological interpretation of the microarray data: the functional consistence of the significant GO categories. - Da Yang 003; Yanhui Li; Hui Xiao; Qing Liu; Min Zhang 009; Jing Zhu 004; Wencai Ma; Chen Yao; Jing Wang 004; Dong Wang 011; Zheng Guo 002; Baofeng Yang (Bioinform., 2008)

Apparently low reproducibility of true differential expression discoveries in microarray studies. - Min Zhang 009; Chen Yao; Zheng Guo 002; Jinfeng Zou; Lin Zhang 057; Hui Xiao; Dong Wang 011; Da Yang 003; Xue Gong; Jing Zhu 004; Yanhui Li; Xia Li 004 (Bioinform., 2008)

Edge-based scoring and searching method for identifying condition-responsive protein-protein interaction sub-network. - Zheng Guo 002; Lei Wang; Yongjin Li; Xue Gong; Chen Yao; Wencai Ma; Dong Wang 011; Yanhui Li; Jing Zhu 004; Min Zhang 009; Da Yang 003; Shaoqi Rao; et al. (Bioinform., 2009)

Viewing cancer genes from co-evolving gene modules. - Jing Zhu 004; Hui Xiao; Xiaopei Shen; Jing Wang 004; Jinfeng Zou; Lin Zhang 057; Da Yang 003; Wencai Ma; Chen Yao; Xue Gong; Min Zhang 009; Yang Zhang 125; et al. (Bioinform., 2010)

A landscape of synthetic viable interactions in cancer. - Yunyan Gu; Ruiping Wang 002; Yue Han; Wenbin Zhou; Zhangxiang Zhao; Tingting Chen; Yuanyuan Zhang; Fuduan Peng; Haihai Liang; Lishuang Qi; Wenyuan Zhao; Da Yang 003; et al. (Briefings Bioinform., 2018)

Bioinformatics approaches to analyzing CRISPR screen data: from dropout screens to single-cell CRISPR screens. - Yueshan Zhao; Min Zhang 009; Da Yang 003 (Quant. Biol., 2022)