Robustness of Metabolic Map Reconstruction. - Dag G. Ahrén; Christos A. Ouzounis (J. Bioinform. Comput. Biol., 2004)

CoGenT++: an extensive and extensible data environment for computational genomics. - Leon Goldovsky; Paul J. Janssen; Dag G. Ahrén; Benjamin Audit; Ildefonso Cases; Nikos Darzentas; Anton J. Enright; Núria López-Bigas; José M. Peregrín-Alvarez; Mike Smith 001; Sophia Tsoka; Victor Kunin; et al. (Bioinform., 2005)

MetCap: a bioinformatics probe design pipeline for large-scale targeted metagenomics. - Sandeep Kumar Kushwaha; Lokeshwaran Manoharan; Tejashwari Meerupati; Katarina Hedlund; Dag G. Ahrén (BMC Bioinform., 2015)

NBSPred: a support vector machine-based high-throughput pipeline for plant resistance protein NBSLRR prediction. - Sandeep Kumar Kushwaha; Pallavi Chauhan; Katarina Hedlund; Dag G. Ahrén (Bioinform., 2016)

Erratum to: MetCap: A bioinformatics probe design pipeline for large-scale targeted metagenomics. - Sandeep Kumar Kushwaha; Lokeshwaran Manoharan; Tejashwari Meerupati; Katarina Hedlund; Dag G. Ahrén (BMC Bioinform., 2016)

CGG toolkit: Software components for computational genomics. - Dimitrios Vasileiou; Christos Karapiperis; Ismini Baltsavia; Anastasia Chasapi; Dag G. Ahrén; Paul J. Janssen; Ioannis Iliopoulos; Vasilis J. Promponas; Anton J. Enright; Christos A. Ouzounis (PLoS Comput. Biol., 2023)