SIMPLE: Sparse Interaction Model over Peaks of moLEcules for fast, interpretable metabolite identification from tandem mass spectra. - Dai Hai Nguyen; Canh Hao Nguyen; Hiroshi Mamitsuka (Bioinform., 2018)

Recent advances and prospects of computational methods for metabolite identification: a review with emphasis on machine learning approaches. - Dai Hai Nguyen; Canh Hao Nguyen; Hiroshi Mamitsuka (Briefings Bioinform., 2019)

ADAPTIVE: leArning DAta-dePendenT, concIse molecular VEctors for fast, accurate metabolite identification from tandem mass spectra. - Dai Hai Nguyen; Canh Hao Nguyen; Hiroshi Mamitsuka (Bioinform., 2019)

Potential Application of Gold Nanospheres as a Surface Plasmon Resonance Based Sensor for In-Situ Detection of Residual Fungicides. - Hang Nguyen Thi Nhat; Ngoc Thuy Trang Le; Nguyen Thi Phuong Phong; Dai Hai Nguyen; Minh-Tri Nguyen-Le (Sensors, 2020)

A generative model for molecule generation based on chemical reaction trees. - Dai Hai Nguyen; Koji Tsuda (CoRR, 2021)

Learning subtree pattern importance for Weisfeiler-Lehmanbased graph kernels. - Dai Hai Nguyen; Canh Hao Nguyen; Hiroshi Mamitsuka (CoRR, 2021)

Learning subtree pattern importance for Weisfeiler-Lehman based graph kernels. - Dai Hai Nguyen; Canh Hao Nguyen; Hiroshi Mamitsuka (Mach. Learn., 2021)

A Particle-Based Algorithm for Distributional Optimization on textit{Constrained Domains} via Variational Transport and Mirror Descent. - Dai Hai Nguyen; Tetsuya Sakurai (CoRR, 2022)

Mirror variational transport: a particle-based algorithm for distributional optimization on constrained domains. - Dai Hai Nguyen; Tetsuya Sakurai (Mach. Learn., 2023)

On a linear fused Gromov-Wasserstein distance for graph structured data. - Dai Hai Nguyen; Koji Tsuda (Pattern Recognit., 2023)

Moreau-Yoshida variational transport: a general framework for solving regularized distributional optimization problems. - Dai Hai Nguyen; Tetsuya Sakurai (Mach. Learn., 2024)

Wasserstein Gradient Flow over Variational Parameter Space for Variational Inference. - Dai Hai Nguyen; Tetsuya Sakurai; Hiroshi Mamitsuka (AISTATS, 2025)

Multiple Wasserstein Gradient Descent Algorithm for Multi-Objective Distributional Optimization. - Dai Hai Nguyen; Hiroshi Mamitsuka; Atsuyoshi Nakamura (UAI, 2025)