Towards parallel evaluation and learning of Boolean μ-formulas with molecules. - Masami Hagiya; Masanori Arita; Daisuke Kiga; Kensaku Sakamoto; Shigeyuki Yokoyama (DNA Based Computers, 1997)

A Realization of DNA Molecular Machine That Walks Autonomously by Using a Restriction Enzyme. - Hiroyuki Sekiguchi; Ken Komiya; Daisuke Kiga; Masayuki Yamamura (DNA, 2007)

Design and Numerical Analysis of RNA Oscillator. - Masahiro Takinoue; Daisuke Kiga; Ko-ichiroh Shohda; Akira Suyama (IWNC, 2007)

A design and feasibility study of reactions comprising DNA molecular machine that walks autonomously by using a restriction enzyme. - Hiroyuki Sekiguchi; Ken Komiya; Daisuke Kiga; Masayuki Yamamura (Nat. Comput., 2008)

Synthetic Biology. - Daisuke Kiga; Masayuki Yamamura (New Gener. Comput., 2008)

RNA Oscillator: Limit Cycle Oscillations based on Artificial Biomolecular Reactions. - Masahiro Takinoue; Daisuke Kiga; Ko-ichiroh Shohda; Akira Suyama (New Gener. Comput., 2009)

Cultivation of Synthetic Biology with the iGEM Competition. - Thiprampai Thamamongood; Nathaniel Z. L. Lim; Trevor Y. H. Ho; Shotaro Ayukawa; Daisuke Kiga; King L. Chow (J. Adv. Comput. Intell. Intell. Informatics, 2013)

Effects of downstream genes on synthetic genetic circuits. - Takefumi Moriya; Masayuki Yamamura; Daisuke Kiga (BMC Syst. Biol., 2014)

High-frequency Noise Attenuation of a Two-component System Responding to Short-pulse Input. - Akifumi Nishida; Ryoji Sekine; Daisuke Kiga; Masayuki Yamamura (CSBio, 2016)

Constraint-based perturbation analysis with cluster Newton method: a case study of personalized parameter estimations with irinotecan whole-body physiologically based pharmacokinetic model. - Shun Asami; Daisuke Kiga; Akihiko Konagaya (BMC Syst. Biol., 2017)

Correlation Between In Vitro and In Vivo Gene-Expression Strengths is Dependent on Bottleneck Process. - Toshihiko Enomoto; Kazumasa Ohtake; Naoko Senda; Daisuke Kiga (New Gener. Comput., 2024)