Mutation Accumulation in Bacteria Exposed to UV Radiation. - Atsushi Shibai; Saburo Tsuru; Bei-Wen Ying; Daisuke Motooka; Kazuyoshi Gotoh; Shota Nakamura; Tetsuya Yomo (ALIFE, 2014)

Reductive evolution towards primitive life: What will we see? - Saburo Tsuru; Shota Nakamura; Daisuke Motooka; Atsushi Shibai (ALIFE, 2016)

A High-Performance Sequence Analysis Engine for Shotgun Metagenomics through GPU Acceleration. - Ying-Feng Hsu; Morito Matsuoka; Nicolas Jung; Yuki Matsumoto; Daisuke Motooka; Shota Nakamura (BIBE, 2018)

Deep Learning Approach for Pathogen Detection Through Shotgun Metagenomics Sequence Classification. - Ying-Feng Hsu; Makiko Ito; Takumi Maruyama; Morito Matsuoka; Nicolas Jung; Yuki Matsumoto; Daisuke Motooka; Shota Nakamura (AIME, 2019)

High-Performance Virus Detection System by using Deep Learning. - Ying-Feng Hsu; Makiko Ito; Takumi Maruyama; Morito Matsuoka; Nicolas Jung; Yuki Matsumoto; Daisuke Motooka; Shota Nakamura (CEC, 2020)