Comparative Promoter Analysis of model Circadian and Circadian Output Genes. - Klemen Spaninger; Rok Kosir; Tadeja Rezen; Natasa Debeljak; Martina Fink; Damjana Rozman (BCBGC, 2008)

An algorithm for rapid computational construction of metabolic networks: A cholesterol biosynthesis example. - Ales Belic; Denis Pompon; Katalin Monostory; Diane Kelly 003; Steven Kelly 002; Damjana Rozman (Comput. Biol. Medicine, 2013)

Structural Insight into the Unique Binding Properties of Pyridylethanol(phenylethyl)amine Inhibitor in Human CYP51. - Urska Zelenko; Milan Hodoscek; Damjana Rozman; Simona Golic Grdadolnik (J. Chem. Inf. Model., 2014)

SteatoNet: The First Integrated Human Metabolic Model with Multi-layered Regulation to Investigate Liver-Associated Pathologies. - Adviti Naik; Damjana Rozman; Ales Belic (PLoS Comput. Biol., 2014)

Computational modelling of genome-scale metabolic networks and its application to CHO cell cultures. - Ziva Rejc; Lidija Magdevska; Tilen Trselic; Timotej Osolin; Rok Vodopivec; Jakob Mraz; Eva Pavliha; Nikolaj Zimic; Tanja Cvitanovic; Damjana Rozman; Miha Moskon; Miha Mraz (Comput. Biol. Medicine, 2017)

Community effort endorsing multiscale modelling, multiscale data science and multiscale computing for systems medicine. - Massimiliano Zanin; Ivan Chorbev; Blaz Stres; Egils Stalidzans; Julio Vera; Paolo Tieri; Filippo Castiglione; Derek Groen; Huiru Zheng; Jan Baumbach; Johannes A. Schmid; José Basilio; et al. (Briefings Bioinform., 2019)

Detecting gene-gene interactions from GWAS using diffusion kernel principal components. - Andrew Walakira; Junior Ocira; Diane Duroux; Ramouna Fouladi; Miha Moskon; Damjana Rozman; Kristel Van Steen (BMC Bioinform., 2022)

Integration of omics data to generate and analyse COVID-19 specific genome-scale metabolic models. - Tadeja Rezen; Alexandre Martins; Miha Mraz; Nikolaj Zimic; Damjana Rozman; Miha Moskon (Comput. Biol. Medicine, 2022)

Integrative computational modeling to unravel novel potential biomarkers in hepatocellular carcinoma. - Andrew Walakira; Cene Skubic; Nejc Nadizar; Damjana Rozman; Tadeja Rezen; Miha Mraz; Miha Moskon (Comput. Biol. Medicine, 2023)

Corrigendum to "Integration of omics data to generate and analyse COVID-19 specific genome-scale metabolic models" [Comput. Biol. Med. 145 (2022) 105428]. - Tadeja Rezen; Alexandre Martins; Miha Mraz; Nikolaj Zimic; Damjana Rozman; Miha Moskon (Comput. Biol. Medicine, 2024)