Iterated Prisoner's Dilemma with Choice and Refusal of Partners: Evolutionary Results. - E. Ann Stanley; Dan Ashlock; Mark D. Smucker (ECAL, 1995)

A Fully Characterized Test Suite for Genetic Programming. - Dan Ashlock; James I. Lathrop (Evolutionary Programming, 1998)

Acquisition of General Adaptive Features by Evolution. - Dan Ashlock; John E. Mayfield (Evolutionary Programming, 1998)

Texture synthesis with tandem genetic algorithms using nonparametric partially ordered Markov models. - Daniel A. Ashlock; Jennifer L. Davidson (CEC, 1999)

Graph based genetic algorithms. - Dan Ashlock; Mark D. Smucker; John Walker (CEC, 1999)

Complexity at large. - Leigh Tesfatsion; Dan Ashlock (Complex., 1999)

Data crawlers for simple optical character recognition. - Dan Ashlock (CEC, 2000)

A pure finite state baseline for Tartarus. - Dan Ashlock; J. Freeman (CEC, 2000)

Iterated function system fractals for the detection and display of DNA reading frame. - Dan Ashlock; James B. Golden III (CEC, 2000)

Greedy closure evolutionary algorithms. - Daniel A. Ashlock; Ling Guo; Fang Qiu (IEEE Congress on Evolutionary Computation, 2002)

Training finite state machines to improve PCR primer design. - Dan Ashlock; Andrew Wittrock; Tsui-Jung Wen (IEEE Congress on Evolutionary Computation, 2002)

Morphometric grayscale texture analysis using foot patterns. - Dan Ashlock; Dean C. Adams; David Doty (IEEE Congress on Evolutionary Computation, 2003)

Thermal agents: an application of genetic programming to virtual engineering. - Daniel A. Ashlock; Kenneth M. Bryden (IEEE Congress on Evolutionary Computation, 2003)

A note on general adaptation in populations of painting robots. - Dan Ashlock; Elizabeth Blankenship; Jonathan Gandrud (IEEE Congress on Evolutionary Computation, 2003)

Evolutionary control of Lsystem interpretation. - Dan Ashlock; Kenneth M. Bryden (IEEE Congress on Evolutionary Computation, 2004)

On taxonomy of evolutionary computation problems. - Dan Ashlock; Kenneth M. Bryden; Steven M. Corns (IEEE Congress on Evolutionary Computation, 2004)

Fingerprints: enabling visualization and automatic analysis of strategies for two player games. - Dan Ashlock; Eun-Youn Kim; Warren K. von Roeschlaub (IEEE Congress on Evolutionary Computation, 2004)

Program induction: building a wall. - Dan Ashlock; James I. Lathrop (IEEE Congress on Evolutionary Computation, 2004)

Simulation of floral specialization in bees. - Dan Ashlock; Jessica Oftelie (IEEE Congress on Evolutionary Computation, 2004)

The effect of tag recognition on non-local adaptation. - Dan Ashlock; Brad Powers (IEEE Congress on Evolutionary Computation, 2004)

Coevolution and Tartarus. - Dan Ashlock; Stephen J. Willson; Nicole P. Leahy (IEEE Congress on Evolutionary Computation, 2004)

An application of graph based evolutionary algorithms for diversity preservation. - Kenneth M. Bryden; Daniel A. Ashlock; Douglas S. McCorkle (IEEE Congress on Evolutionary Computation, 2004)

A comparison of the robustness of evolutionary computation and random walks. - Justin Schonfeld; Daniel A. Ashlock (IEEE Congress on Evolutionary Computation, 2004)

Quantitative trait loci based solution of an inverse radiation heat transfer problem. - Sunil Suram; Kenneth M. Bryden; Daniel A. Ashlock (IEEE Congress on Evolutionary Computation, 2004)

A comparison of evolved finite state classifiers and interpolated Markov models for improving PCR primer design. - Daniel A. Ashlock; Scott J. Emrich; Kenneth Mark Bryden; Steven M. Corns; Tsui-Jung Wen; Patrick S. Schnable (CIBCB, 2004)

A strategy for assembling the maize (Zea mays L.) genome. - Scott J. Emrich; Srinivas Aluru; Yan Fu; Tsui-Jung Wen; Mahesh Narayanan; Ling Guo; Daniel A. Ashlock; Patrick S. Schnable (Bioinform., 2004)

Single parent genetic programming. - Wendy Ashlock; Dan Ashlock (Congress on Evolutionary Computation, 2005)

Rapid training of thermal agents with single parent genetic programming. - Daniel A. Ashlock; Kenneth Mark Bryden; Wendy Ashlock; Stephen P. Gent (Congress on Evolutionary Computation, 2005)

Graph based evolutionary algorithms enhance the identification of Steiner systems. - Daniel A. Ashlock; Kenneth Mark Bryden; Steven M. Corns (Congress on Evolutionary Computation, 2005)

Evolution of L-systems for compact virtual landscape generation. - Daniel A. Ashlock; Stephen P. Gent; Kenneth Mark Bryden (Congress on Evolutionary Computation, 2005)

Techniques for analysis of evolved prisoner's dilemma strategies with fingerprints. - Dan Ashlock; Eun-Youn Kim (Congress on Evolutionary Computation, 2005)

Non-local adaptation of artificial predators and prey. - Daniel A. Ashlock; Adam Sherk (Congress on Evolutionary Computation, 2005)

Nonlinear projection for the display of high dimensional distance data. - Dan Ashlock; Justin Schonfeld (Congress on Evolutionary Computation, 2005)

On the effects of representation on evolving grid robots. - Steven M. Corns; Daniel A. Ashlock; Kenneth Mark Bryden; David Muth Jr. (Congress on Evolutionary Computation, 2005)

Solution transfer rates in graph based evolutionary algorithms. - Steven M. Corns; Kenneth Mark Bryden; Daniel A. Ashlock (Congress on Evolutionary Computation, 2005)

A Novel Variation Operator for More Rapid Evolution of DNA Error Correcting Codes. - Daniel A. Ashlock; Sheridan K. Houghten (CIBCB, 2005)

Depth Annotation of RNA Folds for Secondary Structure Motif Search. - Daniel A. Ashlock; Justin Schonfeld (CIBCB, 2005)

Selection of Genetically Diverse Recombinant Inbreds with an Ordered Gene Evolutionary Algorithm. - Daniel A. Ashlock; Ruth Swanson; Patrick S. Schnable (CIBCB, 2005)

The impact of cellular representation on finite state agents for prisoner's dilemma. - Daniel A. Ashlock; Eun-Youn Kim (GECCO, 2005)

A study of evolutionary robustness in stochastically tiled polyominos. - Justin Schonfeld; Daniel A. Ashlock (GECCO, 2005)

Using the biological taxonomy to access biological literature with PathBinderH. - Jing Ding; Karthikeyan Viswanathan; Daniel Berleant; Laron M. Hughes; Eve Syrkin Wurtele; Daniel A. Ashlock; Julie A. Dickerson; Andy W. Fulmer; Patrick S. Schnable (Bioinform., 2005)

A hybrid genetic programming approach for the analytical solution of differential equations. - Steven J. Kirstukas; Kenneth M. Bryden; Daniel A. Ashlock (Int. J. Gen. Syst., 2005)

Evolutionary computation for modeling and optimization. - Daniel A. Ashlock (Springer, 2006)

Evolutionary Exploration of the Mandelbrot Set. - Daniel A. Ashlock (IEEE Congress on Evolutionary Computation, 2006)

Changes in Prisoner's Dilemma Strategies Over Evolutionary Time With Different Population Sizes. - Wendy Ashlock; Daniel A. Ashlock (IEEE Congress on Evolutionary Computation, 2006)

An Updated Taxonomy of Evolutionary Computation Problems using Graph-based Evolutionary Algorithms. - Daniel A. Ashlock; Kenneth Mark Bryden; Steven M. Corns; Justin Schonfeld (IEEE Congress on Evolutionary Computation, 2006)

Simultaneous Evolution of Bracketed L-system Rules and Interpretation. - Daniel A. Ashlock; Kenneth M. Bryden; Stephen P. Gent (IEEE Congress on Evolutionary Computation, 2006)

Non-photorealistic Rendering of Images as Evolutionary Stained Glass. - Daniel A. Ashlock; Balu Karthikeyan; Kenneth M. Bryden (IEEE Congress on Evolutionary Computation, 2006)

Evolving A Diverse Collection of Robot Path Planning Problems. - Daniel A. Ashlock; Theodore W. Manikas; Kaveh Ashenayi (IEEE Congress on Evolutionary Computation, 2006)

Improving Design Diversity Using Graph Based Evolutionary Algorithms. - Steven M. Corns; Daniel A. Ashlock; Douglas S. McCorkle; Kenneth Mark Bryden (IEEE Congress on Evolutionary Computation, 2006)

Generalized Thermal Agents with Multiple Boundary Conditions and Three-Dimensional Thermal Agents. - Stephen P. Gent; Daniel A. Ashlock; Allan R. Willms; Kenneth M. Bryden (IEEE Congress on Evolutionary Computation, 2006)

AMoEBA Image Segmentation: Modeling of Individual Voronoi Tessellations. - Nathan G. Johnson; Balu Karthikeyan; Daniel A. Ashlock; Kenneth M. Bryden (IEEE Congress on Evolutionary Computation, 2006)

Evaluating Distance Measures for RNA Motif Search. - Justin Schonfeld; Daniel A. Ashlock (IEEE Congress on Evolutionary Computation, 2006)

An Exploration of Differential Utility in Iterated Prisoner's Dilemma. - Dan Ashlock; Wendy Ashlock; Gary Umphry (CIBCB, 2006)

An Evolutionary Algorithm for the Selection of Geographically Informative Species. - Dan Ashlock; Karl Cottenie; Lindsey Carson; Kenneth Mark Bryden; Steven M. Corns (CIBCB, 2006)

Developing Antibiotic Regimens Using Evolutionary Algorithms. - Steven M. Corns; H. Scott Hurd; Dan Ashlock; Kenneth Mark Bryden (CIBCB, 2006)

Filtration and Depth Annotation Improve Non-linear Projection for RNA Motif Discovery. - Justin Schonfeld; Dan Ashlock (CIBCB, 2006)

Grid-Robot Drivers: an Evolutionary Multi-agent Virtual Robotics Task. - Daniel A. Ashlock (CIG, 2006)

Training Function Stacks to play the Iterated Prisoner's Dilemma. - Dan Ashlock (CIG, 2006)

Graph-based evolutionary algorithms. - Kenneth Mark Bryden; Daniel A. Ashlock; Steven M. Corns; Stephen J. Willson (IEEE Trans. Evol. Comput., 2006)

Understanding representational sensitivity in the iterated prisoner's dilemma with fingerprints. - Dan Ashlock; Eun-Youn Kim; Nicole P. Leahy (IEEE Trans. Syst. Man Cybern. Syst., 2006)

Fingerprint analysis of the noisy prisoner's dilemma. - Daniel A. Ashlock; Eun-Youn Kim; Wendy Ashlock (IEEE Congress on Evolutionary Computation, 2007)

A fractal representation for real optimization. - Daniel A. Ashlock; Justin Schonfeld (IEEE Congress on Evolutionary Computation, 2007)

Evolutionary Parameter Setting of Multi-clustering. - Dan Ashlock; Ling Guo (CIBCB, 2007)

Evolving Extremal Epidemic Networks. - Dan Ashlock; Fatemeh Jafargholi (CIBCB, 2007)

Cooperation in Prisoner's Dilemma on Graphs. - Daniel A. Ashlock (CIG, 2007)

Small population effects and hybridization. - Daniel A. Ashlock; Kenneth Mark Bryden; Steven M. Corns (IEEE Congress on Evolutionary Computation, 2008)

The geometry of Tartarus fitness cases. - Daniel A. Ashlock; Elizabeth Warner (IEEE Congress on Evolutionary Computation, 2008)

Behavioral regimes in the evolution of extremal epidemic graphs. - Daniel A. Ashlock; Fatemeh Jafargholi (IEEE Congress on Evolutionary Computation, 2008)

Evolution of artificial ring species. - Daniel A. Ashlock; Taika von Konigslow (IEEE Congress on Evolutionary Computation, 2008)

Transience in the simulation of ring species. - Dan Ashlock; Taika von Konigslow; Elizabeth Clare; Wendy Ashlock (CIBCB, 2008)

Characterization of extremal epidemic networks with diffusion characters. - Dan Ashlock; Colin Lee (CIBCB, 2008)

A model of emotion in the prisoner's dilemma. - Dan Ashlock; Nicholas Rogers (CIBCB, 2008)

Classifying synthetic and biological DNA sequences with side effect machines. - Dan Ashlock; Elizabeth Warner (CIBCB, 2008)

Fingerprinting: Visualization and Automatic Analysis of Prisoner's Dilemma Strategies. - Daniel A. Ashlock; Eun-Youn Kim (IEEE Trans. Evol. Comput., 2008)

Edit metric decoding: a new hope. - Joseph A. Brown; Sheridan K. Houghten; Daniel A. Ashlock (C3S2E, 2009)

Robustness in evolved grid structures. - Daniel A. Ashlock; Justin Schonfeld; James Humphrey (IEEE Congress on Evolutionary Computation, 2009)

Evolved art via control of cellular automata. - Daniel A. Ashlock; Jeffrey Tsang (IEEE Congress on Evolutionary Computation, 2009)

Simulation of the impact of retroviruses on genome organization of an artificial organism. - Daniel A. Ashlock; Wendy Ashlock (CIBCB, 2009)

DNA error correcting codes: No crossover. - Daniel A. Ashlock; Sheridan K. Houghten (CIBCB, 2009)

Diagnostic character location within the cryptic skipper butterfly species complex with an evolutionary algorithm. - Daniel A. Ashlock; Taika von Königslöw (CIBCB, 2009)

Using diffusion characters for the taxonomy of self-organizing social networks. - Daniel A. Ashlock; Colin Lee (CIBCB, 2009)

MULTI-K: accurate classification of microarray subtypes using ensemble k-means clustering. - Eun-Youn Kim; Seon-Young Kim; Daniel A. Ashlock; Dougu Nam (BMC Bioinform., 2009)

Computational Intelligence in Bioinformatics (Fogel, G.B. et al; 2008) [Book review]. - Dan Ashlock (IEEE Comput. Intell. Mag., 2009)

Fingerprint Analysis of the Noisy Prisoner's Dilemma Using a Finite-State Representation. - Daniel A. Ashlock; Eun-Youn Kim; Wendy Ashlock (IEEE Trans. Comput. Intell. AI Games, 2009)

Ring optimization of edit metric codes in DNA. - Daniel A. Ashlock; Sheridan K. Houghten (BCB, 2010)

Virtual retroviruses in grid walkers: Effects on genome organization. - Wendy Ashlock; Daniel A. Ashlock (IEEE Congress on Evolutionary Computation, 2010)

Evolution for automatic assessment of the difficulty of sokoban boards. - Daniel A. Ashlock; Justin Schonfeld (IEEE Congress on Evolutionary Computation, 2010)

Nearest neighbor training of side effect machines for sequence classification. - Daniel A. Ashlock; Andrew McEachern (CIBCB, 2010)

Side effect machines for quaternary edit metric decoding. - Joseph A. Brown; Sheridan K. Houghten; Daniel A. Ashlock (CIBCB, 2010)

Classifying Cytochrome c Oxidase subunit 1 by translation initiation mechanism using side effect machines. - Justin Schonfeld; Dan Ashlock (CIBCB, 2010)

Automatic generation of game elements via evolution. - Daniel A. Ashlock (CIG, 2010)

A fingerprint comparison of different Prisoner's Dilemma payoff matrices. - Daniel A. Ashlock; Eun-Youn Kim; Wendy Ashlock (CIG, 2010)

Domination in Iterated Prisoner's Dilemma. - Joseph Alexander Brown; Daniel A. Ashlock (CCECE, 2011)

Fitness functions for searching the Mandelbrot set. - Daniel A. Ashlock; Joseph A. Brown (IEEE Congress on Evolutionary Computation, 2011)

Shopkeeper strategies in the iterated prisoner's dilemma. - Daniel A. Ashlock; Christopher Kuusela; Monica Cojocaru (IEEE Congress on Evolutionary Computation, 2011)

Financial control of the evolution of autonomous non-player characters. - Daniel A. Ashlock; Sylvia Nguyen (IEEE Congress on Evolutionary Computation, 2011)

Comparison of evolved epidemic networks with diffusion characters. - Daniel A. Ashlock; Elisabeth Shiller; Colin Lee (IEEE Congress on Evolutionary Computation, 2011)

Translation tables: A genetic code in a evolutionary algorithm. - Daniel A. Ashlock; Justin Schonfeld; Paul D. McNicholas (IEEE Congress on Evolutionary Computation, 2011)

Autogeneration of fractal photographic mosaic images. - Joseph A. Brown; Daniel A. Ashlock; John Orth; Sheridan K. Houghten (IEEE Congress on Evolutionary Computation, 2011)

Decomposing the level generation problem with tiles. - Cameron McGuinness; Daniel A. Ashlock (IEEE Congress on Evolutionary Computation, 2011)

Designing artificial organisms for use in biological simulations. - Wendy Ashlock; Daniel A. Ashlock (CIBCB, 2011)

A simulation of bacterial communities. - Daniel A. Ashlock; Andrew McEachern (CIBCB, 2011)

Fitting contact networks to epidemic behavior with an evolutionary algorithm. - Daniel A. Ashlock; Elisabeth Shiller (CIBCB, 2011)

Hormonal systems for prisoners dilemma agents. - Daniel A. Ashlock; Christopher Kuusela; Nicholas Rogers (CIG, 2011)

Incorporating required structure into tiles. - Cameron McGuinness; Daniel A. Ashlock (CIG, 2011)

Tutorials: Cultural Algorithms: Incorporating social intelligence into virtual worlds. - Robert G. Reynolds; Daniel A. Ashlock; Georgios N. Yannakakis; Julian Togelius; Mike Preuss (CIG, 2011)

Simultaneous Dual Level Creation for Games. - Daniel A. Ashlock; Colin Lee; Cameron McGuinness (IEEE Comput. Intell. Mag., 2011)

Search-Based Procedural Generation of Maze-Like Levels. - Daniel A. Ashlock; Colin Lee; Cameron McGuinness (IEEE Trans. Comput. Intell. AI Games, 2011)

Impact of regulatory genes on optimization behavior. - Daniel A. Ashlock; Wendy Ashlock (IEEE Congress on Evolutionary Computation, 2012)

Single parent generalization of cellular automata rules. - Daniel A. Ashlock; Sharon McNicholas (IEEE Congress on Evolutionary Computation, 2012)

Evolutionary games and the study of cooperation: Why has so little progress been made? - Garrison W. Greenwood; Daniel A. Ashlock (IEEE Congress on Evolutionary Computation, 2012)

Evolving a social fabric to fit and epidemic profile. - Daniel A. Ashlock; Elisabeth Shiller (CIBCB, 2012)

A model of competitive exclusion in plants. - Daniel A. Ashlock; Erin Wild (CIBCB, 2012)

From competition to cooperation: Co-evolution in a rewards continuum. - Daniel A. Ashlock; Wendy Ashlock; Spyridon Samothrakis; Simon M. Lucas; Colin Lee (CIG, 2012)

Deck-based prisoner's dilemma. - Daniel A. Ashlock; Elizabeth Knowles (CIG, 2012)

Representation in Evolutionary Computation. - Daniel A. Ashlock; Cameron McGuinness; Wendy Ashlock (WCCI, 2012)

On the synthesis of DNA error correcting codes. - Daniel A. Ashlock; Sheridan K. Houghten; Joseph Alexander Brown; John Orth (Biosyst., 2012)

Functions for the analysis of exploration and exploitation. - Daniel A. Ashlock; Nikola Krsic; Gary B. Fogel (IEEE Congress on Evolutionary Computation, 2013)

Evolutionary cellular automata bonsai. - Daniel A. Ashlock; Carolyn Pugh (IEEE Congress on Evolutionary Computation, 2013)

Edit metric decoding: Representation strikes back. - James Alexander Hughes; Joseph A. Brown; Sheridan K. Houghten; Daniel A. Ashlock (IEEE Congress on Evolutionary Computation, 2013)

Woven string kernels for DNA sequence classification. - Andrew McEachern; Daniel A. Ashlock (IEEE Congress on Evolutionary Computation, 2013)

Binary decision automata modelling stress in the workplace. - Matthew Page; Daniel A. Ashlock (IEEE Congress on Evolutionary Computation, 2013)

Creativity and competitiveness in polyomino-developing game playing agents. - Daniel A. Ashlock; Jeremy Gilbert (CIG, 2013)

Landscape automata for search based procedural content generation. - Daniel A. Ashlock; Cameron McGuinness (CIG, 2013)

The impact of connection topology and agent size on cooperation in the iterated prisoner's dilemma. - Lee-Ann Barlow; Daniel A. Ashlock (CIG, 2013)

An agent based model of stress in the workplace. - Daniel A. Ashlock; Matthew Page (EAIS, 2013)

The impact of varying resources available to Iterated Prisoner's Dilemma agents. - Daniel A. Ashlock; Eun-Youn Kim (FOCI, 2013)

Recentering, reanchoring & restarting an evolutionary algorithm. - James Alexander Hughes; Sheridan K. Houghten; Daniel A. Ashlock (NaBIC, 2013)

Development of antibiotic regimens using graph based evolutionary algorithms. - Steven M. Corns; Daniel A. Ashlock; Kenneth Mark Bryden (Biosyst., 2013)

Sequence classification with side effect machines evolved via ring optimization. - Andrew McEachern; Daniel A. Ashlock; Justin Schonfeld (Biosyst., 2013)

Guest Editorial: Special Issue on Understanding Complex Evolutionary Systems. - Daniel A. Ashlock; Graham Kendall; Siang Yew Chong (IEEE Trans. Evol. Comput., 2013)

Agent-Case Embeddings for the Analysis of Evolved Systems. - Daniel A. Ashlock; Colin Lee (IEEE Trans. Evol. Comput., 2013)

Fitness Landscapes of Evolved Apoptotic Cellular Automata. - Daniel A. Ashlock; Sharon McNicholas (IEEE Trans. Evol. Comput., 2013)

∗Tego - A framework for adversarial planning. - Daniel A. Ashlock; Philip Hingston (IEEE Congress on Evolutionary Computation, 2014)

Agent-based modelling of resource flow in plant networks. - Daniel A. Ashlock; Asena Goren (CIBCB, 2014)

Recentering and Restarting Genetic Algorithm variations for DNA Fragment Assembly. - James Alexander Hughes; Sheridan K. Houghten; Guillermo M. Mallén-Fullerton; Daniel A. Ashlock (CIBCB, 2014)

Using associators to generate ensemble biclustering from multiple evolved biclusterings. - Eun-Youn Kim; Daniel A. Ashlock (CIBCB, 2014)

Shape control of side effect machines for DNA classification. - Andrew McEachern; Daniel A. Ashlock (CIBCB, 2014)

Shaped prisoner's dilemma automata. - Wendy Ashlock; Daniel A. Ashlock (CIG, 2014)

Automatic generation of fantasy role-playing modules. - Daniel A. Ashlock; Cameron McGuinness (CIG, 2014)

A discrete representation for real optimization with unique search properties. - Daniel A. Ashlock; Jeremy Gilbert (FOCI, 2014)

Test problems and representations for graph evolution. - Daniel A. Ashlock; Justin Schonfeld; Lee-Ann Barlow; Colin Lee (FOCI, 2014)

The evolution of exploitation. - Wendy Ashlock; Jeffrey Tsang; Daniel A. Ashlock (FOCI, 2014)

A novel engineering tool for creative design of fluid systems. - Peter E. Johnson; Daniel A. Ashlock; Kenneth Mark Bryden (Eng. Comput., 2014)

Recentering and restarting a genetic algorithm using a generative representation for an ordered gene problem. - James Alexander Hughes; Sheridan K. Houghten; Daniel A. Ashlock (Int. J. Hybrid Intell. Syst., 2014)

Evolving Point Packings in the Plane. - Daniel A. Ashlock; Philip Hingston; Cameron McGuinness (ACALCI, 2015)

A class of representations for evolving graphs. - Daniel A. Ashlock; Lee-Ann Barlow (CEC, 2015)

Ring optimization with extinction. - Daniel A. Ashlock; Sierra Gillis; Gary B. Fogel (CEC, 2015)

Evolving fractal art with a directed acyclic graph genetic programming representation. - Daniel A. Ashlock; Jeffrey Tsang (CEC, 2015)

Evolution of 2D apoptotic cellular automata. - Jennifer Garner; Daniel A. Ashlock (CEC, 2015)

Flow of control in linear genetic programming. - Justin Schonfeld; Daniel A. Ashlock (CEC, 2015)

Evolving DNA classifiers with extinction based ring optimization. - Daniel A. Ashlock; Sierra Gillis; Jennifer Garner; Gary B. Fogel (CIBCB, 2015)

Lexicode crossover for embeddable biomarkers. - Daniel A. Ashlock; Sheridan K. Houghten (CIBCB, 2015)

Chaos automata for sequence visualization. - Daniel A. Ashlock; Cameron McGuinness; Wendy Ashlock (CIBCB, 2015)

Interactive evolution instead of default parameters. - Daniel A. Ashlock; Cameron McGuinness; Joseph O'Neill (CIBCB, 2015)

A comparison of incremental community assembly with evolutionary community selection. - Daniel A. Ashlock; Meghan Timmins (CIBCB, 2015)

Varying decision inputs in Prisoner's Dilemma. - Lee-Ann Barlow; Daniel A. Ashlock (CIBCB, 2015)

Stress and productivity performance in the workforce modelled with binary decision automata. - Matthew Page; Daniel A. Ashlock (CIBCB, 2015)

Tutorial II: Representations for evolutionary computation in games. - Daniel A. Ashlock (CIG, 2015)

Evolvable fashion-based cellular automata for generating cavern systems. - Daniel A. Ashlock (CIG, 2015)

The Impact of Obstruction on a Model of Competitive Exclusion in Plants. - Jeffrey Tsang; Daniel A. Ashlock (SSCI, 2015)

Multiple Opponent Optimization of Prisoner's Dilemma Playing Agents. - Daniel A. Ashlock; Joseph Alexander Brown; Philip Hingston (IEEE Trans. Comput. Intell. AI Games, 2015)

Evolutionary Nonlinear Projection. - Daniel A. Ashlock; Andrew McEachern (IEEE Trans. Evol. Comput., 2015)

Evolutionary partitioning regression with function stacks. - Daniel A. Ashlock; Joseph Alexander Brown (CEC, 2016)

Generalized divide the dollar. - Daniel A. Ashlock; Garrison W. Greenwood (CEC, 2016)

Conway crossover to create hyperdimensional point packings, with applications. - Daniel A. Ashlock; Steffen Graether (CEC, 2016)

The do what's possible representation. - Daniel A. Ashlock; Sierra Gillis; Andrew McEachern; Jeffrey Tsang (CEC, 2016)

The impact of elite fraction and population size on evolved iterated prisoner's dilemma agents. - Daniel A. Ashlock; Eun-Youn Kim (CEC, 2016)

An adaptive generative representation for evolutionary computation. - Daniel A. Ashlock; James Montgomery 001 (CEC, 2016)

Evolving polyomino puzzles. - Daniel A. Ashlock; Lauren Taylor (CEC, 2016)

Adding local edge mobility to graph evolution. - Daniel A. Ashlock; Meghan Timmins (CEC, 2016)

Evolvable warps for data normalization. - Jeremy Gilbert; Daniel A. Ashlock (CEC, 2016)

Revisiting epidemic network evolution with a new representation. - Meghan Timmins; Daniel A. Ashlock (CIBCB, 2016)

Multiple Worlds Model of Evolution for demographic appropriate radio playlists. - Joseph Alexander Brown; Daniel A. Ashlock (SSCI, 2016)

Restarting and recentering genetic algorithm variations for DNA fragment assembly: The necessity of a multi-strategy approach. - James Alexander Hughes; Sheridan K. Houghten; Daniel A. Ashlock (Biosyst., 2016)

Modeling undependable subsidies with three-player generalized divide the dollar. - Daniel A. Ashlock; Garrison W. Greenwood (CEC, 2017)

Evolutionary design of FRAX decks. - Daniel A. Ashlock; Andrew McEachern (CEC, 2017)

Applying the biased form of the adaptive generative representation. - James Montgomery 001; Daniel A. Ashlock (CEC, 2017)

A note on population size inspired by the extinction of mammoths. - Daniel A. Ashlock; Wendy Ashlock (CIBCB, 2017)

Infinite string block matching features for DNA classification. - Daniel A. Ashlock; Sierra Gillis; Wendy Ashlock (CIBCB, 2017)

Hybridization and ring optimization for larger sets of embeddable biomarkers. - Daniel A. Ashlock; Sheridan K. Houghten (CIBCB, 2017)

A novel representation for boolean networks designed to enhance heritability and scalability. - Daniel A. Ashlock; Gonzalo A. Ruz (CIBCB, 2017)

Inferring bistable lac operen Boolean regulatory networks using evolutionary computation. - Gonzalo A. Ruz; Daniel A. Ashlock; Thomas Ledger; Eric Goles 001 (CIBCB, 2017)

General video game playing escapes the no free lunch theorem. - Daniel A. Ashlock; Diego Pérez-Liébana; Amanda Saunders (CIG, 2017)

Using multiple worlds for multiple agent roles in games. - Joseph Alexander Brown; Daniel A. Ashlock (CIG, 2017)

Network induction for epidemic profiles with a novel representation. - Meghan Timmins; Daniel A. Ashlock (Biosyst., 2017)

Changing Resources Available to Game Playing Agents: Another Relevant Design Factor in Agent Experiments. - Eun-Youn Kim; Daniel A. Ashlock (IEEE Trans. Comput. Intell. AI Games, 2017)

On the Design of Game-Playing Agents - Eun-Youn Kim; Daniel A. Ashlock (Morgan & Claypool Publishers, 2017)

Exploiting Fertility to Enable Automatic Content Generation to Ameliorate User Fatigue in Interactive Evolutionary Computation. - Daniel A. Ashlock; Joseph Alexander Brown; Lolita Sultanaeva (CEC, 2018)

Two Population Studies of Evolving Game Playing Agents. - Daniel A. Ashlock; Eun-Youn Kim (CEC, 2018)

On the Evolution of Fairness in N-player Ultimatum Games. - Garrison W. Greenwood; Daniel A. Ashlock (CEC, 2018)

Parameter selection for modeling of epidemic networks. - Michael Dubé; Sheridan K. Houghten; Daniel A. Ashlock (CIBCB, 2018)

Hierarchical clustering and tree stability. - Amanda Saunders; Daniel A. Ashlock; Sheridan K. Houghten (CIBCB, 2018)

Data driven point packing for fast clustering. - Matthew Stoodley; Daniel A. Ashlock; Steffen Graether (CIBCB, 2018)

Evolving Number Sentence Morphing Puzzles. - Daniel A. Ashlock; Courtney Kolthof (CIG, 2018)

Toward General Mathematical Game Playing Agents. - Daniel A. Ashlock; Eun-Youn Kim; Diego Pérez-Liébana (CIG, 2018)

Evolving Diverse Cellular Automata Based Level Maps. - Daniel A. Ashlock; Matthew Kreitzer (SEDA, 2018)

Computational Intelligence Techniques in Bioinformatics and Bioengineering [Guest Editorial]. - Richard Allmendinger 001; Daniel A. Ashlock; Sansanee Auephanwiriyakul (IEEE Comput. Intell. Mag., 2018)

Exploring Representation in Evolutionary Level Design - Daniel A. Ashlock (Morgan & Claypool Publishers, 2018)

A Greedy, Generative, Lattice Representation for Point Packing. - Daniel A. Ashlock; Jeremy Gilbert (CEC, 2019)

Applying an Adaptive Generative Representation to the Investigation of Affordances in Puzzles. - Daniel A. Ashlock; James Montgomery 001 (CEC, 2019)

Modelling Standard Work with Simple Virtual Agents. - Daniel A. Ashlock; Amanda Saunders; James Marshall; David Calder (CEC, 2019)

Parameter Tuning of a Peak Fitting Algorithm with an Evolved Experimental Design. - Rachel Brown; Daniel A. Ashlock (CEC, 2019)

Representation for Evolution of Epidemic Models. - Michael Dubé; Sheridan K. Houghten; Daniel A. Ashlock (CEC, 2019)

Dilation Functions in Global Optimization. - Marco S. Nobile; Paolo Cazzaniga; Daniel A. Ashlock (CEC, 2019)

Implementing Phenotypic Plasticity with an Adaptive Generative Representation. - Daniel A. Ashlock; Wendy Ashlock; James Montgomery 001 (CIBCB, 2019)

Large Block Matching Characters for Dehydrin Classification. - Daniel A. Ashlock; Sierra Gillis; Amanda Saunders; Andrew Riley (CIBCB, 2019)

Pandemic: A Graph Evolution Story. - Michael Dubé; Sheridan K. Houghten; Daniel A. Ashlock (CIBCB, 2019)

Prisoner's Dilemma Agents with Phenotypic Plasticity. - Daniel A. Ashlock; Eun-Youn Kim; Amanda Saunders (CoG, 2019)

The Riddle of Togelby. - Daniel A. Ashlock; Christoph Salge (CoG, 2019)

Automatic Generation of Level Maps with the Do What's Possible Representation. - Daniel A. Ashlock; Christoph Salge (CoG, 2019)

Monte Carlo Strategies for Exploiting Fairness in N-player Ultimatum Games. - Garrison W. Greenwood; Daniel A. Ashlock (CoG, 2019)

Automatic Generation of Diverse Cavern Maps with Morphing Cellular Automata. - Matthew Kreitzer; Daniel A. Ashlock; Rajesh Pereira (CoG, 2019)

Identification of critical connectors in the directed reaction-centric graphs of microbial metabolic networks. - Eun-Youn Kim; Daniel A. Ashlock; Sung Ho Yoon (BMC Bioinform., 2019)

Fast Start Differential Calculus - Daniel A. Ashlock (Morgan & Claypool Publishers, 2019)

Fast Start Integral Calculus - Daniel A. Ashlock (Morgan & Claypool Publishers, 2019)

Fast Start Advanced Calculus - Daniel A. Ashlock (Morgan & Claypool Publishers, 2019)

Necrotic Control of the Aesthetics of Evolved Art. - Daniel A. Ashlock; Julie Greensmith (CEC, 2020)

Evolutionary Graph Compression and Diffusion Methods for City Discovery in Role Playing Games. - Joseph Alexander Brown; Daniel A. Ashlock; Sheridan K. Houghten; Angelo Romualdo (CEC, 2020)

Clustering Julia Set Examples to Enhance Evolution of Fractal Parameters. - Andrew Dong; Daniel A. Ashlock (CEC, 2020)

Modelling of Vaccination Strategies for Epidemics using Evolutionary Computation. - Michael Dubé; Sheridan K. Houghten; Daniel A. Ashlock (CEC, 2020)

Which random is the best random? A study on sampling methods in Fourier surrogate modeling. - Marco S. Nobile; Simone Spolaor; Paolo Cazzaniga; Daniele M. Papetti; Daniela Besozzi; Daniel A. Ashlock; Luca Manzoni (CEC, 2020)

Odd Distance Anchors for Rapid Clustering. - Daniel A. Ashlock; Haiyang Chang; Matthew Stoodley (CIBCB, 2020)

Evolving the Curve. - Michael Dubé; Sheridan K. Houghten; Daniel A. Ashlock; James Alexander Hughes (CIBCB, 2020)

Vaccinating a Population is a Programming Problem. - James Alexander Hughes; Michael Dubé; Sheridan K. Houghten; Daniel A. Ashlock (CIBCB, 2020)

Monte Carlo Tree Search Strategies in 2-Player Iterated Prisoner Dilemma Games. - Garrison W. Greenwood; Daniel A. Ashlock (CoG, 2020)

Further Exploration of Necrotic Control of Evolved Art. - Daniel A. Ashlock; Julie Greensmith (SSCI, 2020)

We Are Not Pontius Pilate: Acknowledging Ethics and Policy. - James Alexander Hughes; William Hannah; Peter Kikkert; Barry MacKenzie; Wendy Ashlock; Sheridan K. Houghten; Daniel A. Ashlock; Matthew Stoodley; Michael Dubé; Rachel Brown; Amanda Saunders (SSCI, 2020)

A polyomino puzzle for arithmetic practice. - Jérémy Foxcroft; Daniel A. Ashlock (J. Int. Comput. Games Assoc., 2020)

Testing a Protocol for Characterizing Game Playing Agents Trained via Evolution on a New Game. - Eun-Youn Kim; Daniel A. Ashlock (IEEE Trans. Games, 2020)

An Introduction to Proofs with Set Theory - Daniel A. Ashlock; Colin Lee (Morgan & Claypool Publishers, 2020)

If You Can't Beat It, Squash It: Simplify Global Optimization by Evolving Dilation Functions. - Daniele M. Papetti; Daniel A. Ashlock; Paolo Cazzaniga; Daniela Besozzi; Marco S. Nobile (CEC, 2021)

Necrotic Behavioral Control of Agent Behavior in the Iterated Prisoner's Dilemma. - Amanda Saunders; Daniel A. Ashlock; Julie Greensmith (CEC, 2021)

Ring Optimization of Epidemic Contact Networks. - Daniel A. Ashlock; Joseph Alexander Brown; Wendy Ashlock; Michael Dubé (CIBCB, 2021)

One Moose, Two Moose, Three Fields, More? - Daniel A. Ashlock; Joseph Alexander Brown; Sheridan K. Houghten; Munir Makhmutov (CIBCB, 2021)

A Comparison of Novel Representations for Evolving Epidemic Networks. - Daniel A. Ashlock; Michael Dubé (CIBCB, 2021)

Representational Sensitivity for Divide the Dollar Playing Agents. - Andrew Dong; Daniel A. Ashlock (CoG, 2021)

A Family of Turn Based Strategy Games with Moose. - Daniel A. Ashlock; Joseph Alexander Brown; Connor Gregor; Munir Makhmutov (SSCI, 2021)

The Non-Walking Triangle Optimization Representation: Enabling Monte Carlo Tree Search-like Methods for Real Parameter Optimization Problems. - Rachel Brown; Daniel A. Ashlock (SSCI, 2021)

Procedural Content Generation of Levels with Increased Connectedness using Complex String Generators. - Michael Dubé; Daniel A. Ashlock (SSCI, 2021)

A comparison of the Moran Process and replicator equations for evolving social dilemma game strategies. - Garrison W. Greenwood; Daniel A. Ashlock (Biosyst., 2021)

An Evolutionary Algorithm with Crossover and Mutation for Model-Based Clustering. - Sharon M. McNicholas; Paul D. McNicholas; Daniel A. Ashlock (J. Classif., 2021)

The algebraic solvability of the novel lamplighter puzzle. - Connor Gregor; Dan Ashlock; Allan R. Willms (J. Int. Comput. Games Assoc., 2021)

Mathematical Problem Factories: Almost Endless Problem Generation - Andrew McEachern; Daniel A. Ashlock (Morgan & Claypool Publishers, 2021)

Evolving Neural Networks for a Generalized Divide the Dollar Game. - Garrison W. Greenwood; Daniel A. Ashlock (CEC, 2022)

Local Bubble Dilation Functions: Hypersphere-bounded Landscape Deformations Simplify Global Optimization. - Daniele M. Papetti; Vasco Coelho; Daniel A. Ashlock; Paolo Cazzaniga; Simone Spolaor; Daniela Besozzi; Marco S. Nobile (CIBCB, 2022)

Editorial: 2020 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology (IEEE CIBCB 2020). - Gonzalo A. Ruz; Daniel A. Ashlock; Richard Allmendinger 001; Gary B. Fogel (Biosyst., 2022)

Human-Game AI Interaction (Dagstuhl Seminar 22251). - Dan Ashlock; Setareh Maghsudi; Diego Perez Liebana; Pieter Spronck; Manuel Eberhardinger (Dagstuhl Reports, 2022)

A novel linear representation for evolving matrices. - Connor Gregor; Daniel A. Ashlock; Gonzalo A. Ruz; Duncan MacKinnon; David Kribs (Soft Comput., 2022)

A Representation for Many Player Generalized Divide the Dollar Games. - Garrison W. Greenwood; Daniel A. Ashlock (Games, 2023)

Models of Representation in Computational Intelligence [Guest Editorial]. - Marco S. Nobile; Luca Manzoni; Daniel A. Ashlock; Rong Qu (IEEE Comput. Intell. Mag., 2023)

Anchor Clustering for million-scale immune repertoire sequencing data. - Haiyang Chang; Daniel A. Ashlock; Steffen P. Graether; Stefan M. Keller (BMC Bioinform., 2024)