Fast and efficient computation of domain-domaininteractions from known protein structures in the PDB. - Panos Dafas; Dan M. Bolser; Jacek Gomoluch; Jong-Chan Park; Michael Schroeder 001 (German Conference on Bioinformatics, 2003)

Visualisation and graph-theoretic analysis of a large-scale protein structural interactome. - Dan M. Bolser; Panos Dafas; Richard Harrington; Jong-Chan Park; Michael Schroeder 001 (BMC Bioinform., 2003)

Using convex hulls to extract interaction interfaces from known structures. - Panos Dafas; Dan M. Bolser; Jacek Gomoluch; Jong-Chan Park; Michael Schroeder 001 (Bioinform., 2004)

Large-scale co-evolution analysis of protein structural interlogues using the global protein structural interactome map (PSIMAP). - Wan Kyu Kim; Dan M. Bolser; Jong H. Park (Bioinform., 2004)

PSIbase: a database of Protein Structural Interactome map (PSIMAP). - Sungsam Gong; Giseok Yoon; Insoo Jang; Dan M. Bolser; Panos Dafas; Michael Schroeder 001; Hansol Choi; Yoobok Cho; Kyungsook Han; Sunghoon Lee; Hwanho Choi; Michael Lappe; et al. (Bioinform., 2005)

Comparative interactomics analysis of protein family interaction networks using PSIMAP (protein structural interactome map). - Daeui Park; Semin Lee; Dan M. Bolser; Michael Schroeder 001; Michael Lappe; Donghoon Oh; Jong Bhak (Bioinform., 2005)

A protein domain interaction interface database: InterPare. - Sungsam Gong; Changbum Park; Hansol Choi; Junsu Ko; Insoo Jang; Jungsul Lee; Dan M. Bolser; Donghoon Oh; Deok-Soo Kim; Jong Bhak (BMC Bioinform., 2005)

PDBWiki: added value through community annotation of the Protein Data Bank. - Henning Stehr; Jose M. Duarte; Michael Lappe; Jong Bhak; Dan M. Bolser (Database J. Biol. Databases Curation, 2010)

MetaBase - the wiki-database of biological databases. - Dan M. Bolser; Pierre-Yves Chibon; Nicolas Palopoli; Sungsam Gong; Daniel Jacob; Victoria Dominguez Del Angel; Daniel Swan; Sebastian Bassi; Virginia González; Prashanth Suravajhala; Seungwoo Hwang; Paolo Romano 001; et al. (Nucleic Acids Res., 2012)

The SEQanswers wiki: a wiki database of tools for high-throughput sequencing analysis. - Jing-Woei Li; Keith Robison; Marcel Martin; Andreas Sjödin; Björn Usadel; Matthew Young; Eric C. Olivares; Dan M. Bolser (Nucleic Acids Res., 2012)

The NGS WikiBook: a dynamic collaborative online training effort with long-term sustainability. - Jing-Woei Li; Dan M. Bolser; Magnus Manske; Federico Manuel Giorgi; Nikolay Vyahhi; Björn Usadel; Bernardo J. Clavijo; Ting-Fung Chan; Nathalie Wong; Daniel R. Zerbino; Maria Victoria Schneider (Briefings Bioinform., 2013)

EDAM: an ontology of bioinformatics operations, types of data and identifiers, topics and formats. - Jon C. Ison; Matús Kalas; Inge Jonassen; Dan M. Bolser; Mahmut Uludag; Hamish McWilliam; James Malone; Rodrigo Lopez; Steve Pettifer; Peter M. Rice (Bioinform., 2013)

Ensembl Genomes 2013: scaling up access to genome-wide data. - Paul Julian Kersey; James E. Allen; Mikkel B. Christensen; Paul Davis 001; Lee J. Falin; Christoph Grabmueller; Daniel Seth Toney Hughes; Jay C. Humphrey; Arnaud Kerhornou; Julia Khobova; Nicholas Langridge; Mark D. McDowall; et al. (Nucleic Acids Res., 2014)

Gramene 2013: comparative plant genomics resources. - Marcela K. Monaco; Joshua C. Stein; Sushma Naithani; Sharon Wei; Palitha Dharmawardhana; Sunita Kumari; Vindhya Amarasinghe; Ken Youens-Clark; James Thomason; Justin Preece; Shiran Pasternak; Andrew Olson; et al. (Nucleic Acids Res., 2014)

Tools and data services registry: a community effort to document bioinformatics resources. - Jon C. Ison; Kristoffer Rapacki; Hervé Ménager; Matús Kalas; Emil Rydza; Piotr Chmura; Christian Anthon; Niall Beard; Karel Berka; Dan M. Bolser; Tim Booth; Anthony Bretaudeau; et al. (Nucleic Acids Res., 2016)

Ensembl Genomes 2016: more genomes, more complexity. - Paul Julian Kersey; James E. Allen; Irina M. Armean; Sanjay Boddu; Bruce J. Bolt; Denise Carvalho-Silva; Mikkel B. Christensen; Paul Davis 001; Lee J. Falin; Christoph Grabmueller; Jay C. Humphrey; Arnaud Kerhornou; et al. (Nucleic Acids Res., 2016)

Gramene 2016: comparative plant genomics and pathway resources. - Marcela K. Tello-Ruiz; Joshua C. Stein; Sharon Wei; Justin Preece; Andrew Olson; Sushma Naithani; Vindhya Amarasinghe; Palitha Dharmawardhana; Yinping Jiao; Joseph Mulvaney; Sunita Kumari; Kapeel Chougule; et al. (Nucleic Acids Res., 2016)

Ensembl Genomes 2018: an integrated omics infrastructure for non-vertebrate species. - Paul Julian Kersey; James E. Allen; Alexis Allot; Matthieu Barba; Sanjay Boddu; Bruce J. Bolt; Denise Carvalho-Silva; Mikkel B. Christensen; Paul Davis 001; Christoph Grabmueller; Navin Kumar; Zicheng Liu 004; et al. (Nucleic Acids Res., 2018)

Gramene 2018: unifying comparative genomics and pathway resources for plant research. - Marcela K. Tello-Ruiz; Sushma Naithani; Joshua C. Stein; Parul Gupta; Michael Campbell; Andrew Olson; Sharon Wei; Justin Preece; Matthew J. Geniza; Yinping Jiao; Young Koung Lee; Bo Wang 117; et al. (Nucleic Acids Res., 2018)

Ensembl Genomes 2020 - enabling non-vertebrate genomic research. - Kevin L. Howe; Bruno Contreras-Moreira; Nishadi De Silva; Gareth Maslen; Wasiu A. Akanni; James E. Allen; Jorge Álvarez-Jarreta; Matthieu Barba; Dan M. Bolser; Lahcen Cambell; Manuel Carbajo; Marc Chakiachvili; et al. (Nucleic Acids Res., 2020)

Gramene 2021: harnessing the power of comparative genomics and pathways for plant research. - Marcela K. Tello-Ruiz; Sushma Naithani; Parul Gupta; Andrew Olson; Sharon Wei; Justin Preece; Yinping Jiao; Bo Wang 117; Kapeel Chougule; Priyanka Garg; Justin Elser; Sunita Kumari; et al. (Nucleic Acids Res., 2021)