The capacity for multistability in small gene regulatory networks. - Dan Siegal-Gaskins; Erich Grotewold; Gregory D. Smith (BMC Syst. Biol., 2009)

Model-Based Deconvolution of Cell Cycle Time-Series Data Reveals Gene Expression Details at High Resolution. - Dan Siegal-Gaskins; Joshua N. Ash; Sean Crosson (PLoS Comput. Biol., 2009)

In silico synchronization of cellular populations through expression data deconvolution. - Marisa C. Eisenberg; Joshua N. Ash; Dan Siegal-Gaskins (DAC, 2011)

Emergence of Switch-Like Behavior in a Large Family of Simple Biochemical Networks. - Dan Siegal-Gaskins; Maria Katherine Mejia-Guerra; Gregory D. Smith; Erich Grotewold (PLoS Comput. Biol., 2011)

Biomolecular resource utilization in elementary cell-free gene circuits. - Dan Siegal-Gaskins; Vincent Noireaux; Richard M. Murray (ACC, 2013)

Analysis-based parameter estimation of an in vitro transcription-translation system. - Zoltán A. Tuza; Dan Siegal-Gaskins; Jongmin Kim 001; Gábor Szederkényi (ECC, 2015)