Towards the contribution of the p38MAPK pathway to the dual role of TGFβ in cancer: A boolean model approach. - Veronica V. Rossato; Daner Acunha Silveira; Shantanu Gupta; José Carlos Merino Mombach (Comput. Biol. Medicine, 2019)

The Wnt pathway can stabilize hybrid phenotypes in the epithelial-mesenchymal transition: A logical modeling approach. - Daner Acunha Silveira; Shantanu Gupta; Marialva Sinigaglia; José Carlos Merino Mombach (Comput. Biol. Chem., 2022)

A Boolean model of the oncogene role of FAM111B in lung adenocarcinoma. - Shantanu Gupta; Daner Acunha Silveira; Ronaldo Fumio Hashimoto (Comput. Biol. Chem., 2023)

Hypoxia-driven hybrid phenotypes in Ewing sarcoma: Insights from computational epithelial-mesenchymal transition modeling. - Daner Acunha Silveira; Shantanu Gupta; André T. Brunetto; José Carlos Merino Mombach; Marialva Sinigaglia (J. Comput. Sci., 2024)

PTEN expression can be used as a switch between senescence and apoptosis in breast cancer cells according to a logical model of the G2/M checkpoint. - Yolanda M. B. Marcello; Daner Acunha Silveira; Shantanu Gupta; José Carlos Merino Mombach (Biosyst., 2024)