Finding Archetypal Spaces Using Neural Networks. - David van Dijk; Daniel B. Burkhardt; Matthew Amodio; Alexander Tong 001; Guy Wolf; Smita Krishnaswamy (IEEE BigData, 2019)

Vertex-Frequency Clustering. - Daniel B. Burkhardt; Jay S. Stanley III; Guy Wolf; Smita Krishnaswamy (DSW, 2019)

Finding Archetypal Spaces for Data Using Neural Networks. - David van Dijk; Daniel B. Burkhardt; Matthew Amodio; Alexander Tong 001; Guy Wolf; Smita Krishnaswamy (CoRR, 2019)

Multimodal single cell data integration challenge: Results and lessons learned. - Christopher Lance; Malte D. Lücken; Daniel B. Burkhardt; Robrecht Cannoodt; Pia Rautenstrauch; Anna Laddach; Aidyn Ubingazhibov; Zhi-Jie Cao; Kaiwen Deng; Sumeer Khan; Qiao Liu 008; Nikolay Russkikh; et al. (NeurIPS (Competition and Demos), 2021)

Generating hard-to-obtain information from easy-to-obtain information: Applications in drug discovery and clinical inference. - Matthew Amodio; Dennis L. Shung; Daniel B. Burkhardt; Patrick Wong; Michael Simonov; Yu Yamamoto; David van Dijk; Francis Perry Wilson; Akiko Iwasaki; Smita Krishnaswamy (Patterns, 2021)

How to Build the Virtual Cell with Artificial Intelligence: Priorities and Opportunities. - Charlotte Bunne; Yusuf H. Roohani; Yanay Rosen; Ankit Gupta; Xikun Zhang 001; Marcel Roed; Theo Alexandrov; Mohammed AlQuraishi; Patricia Brennan; Daniel B. Burkhardt; Andrea Califano; Jonah Cool; et al. (CoRR, 2024)