Rapid model quality assessment for protein structure predictions using the comparison of multiple models without structural alignments. - Liam J. McGuffin; Daniel B. Roche (Bioinform., 2010)

The binding site distance test score: a robust method for the assessment of predicted protein binding sites. - Daniel B. Roche; Stuart J. Tetchner; Liam J. McGuffin (Bioinform., 2010)

FunFOLD: an improved automated method for the prediction of ligand binding residues using 3D models of proteins. - Daniel B. Roche; Stuart J. Tetchner; Liam J. McGuffin (BMC Bioinform., 2011)

The IntFOLD server: an integrated web resource for protein fold recognition, 3D model quality assessment, intrinsic disorder prediction, domain prediction and ligand binding site prediction. - Daniel B. Roche; Maria T. Buenavista; Stuart J. Tetchner; Liam J. McGuffin (Nucleic Acids Res., 2011)

Improvement of 3D protein models using multiple templates guided by single-template model quality assessment. - Maria T. Buenavista; Daniel B. Roche; Liam J. McGuffin (Bioinform., 2012)

The ModFOLD4 server for the quality assessment of 3D protein models. - Liam J. McGuffin; Maria T. Buenavista; Daniel B. Roche (Nucleic Acids Res., 2013)

The FunFOLD2 server for the prediction of protein-ligand interactions. - Daniel B. Roche; Maria T. Buenavista; Liam J. McGuffin (Nucleic Acids Res., 2013)

IntFOLD: an integrated server for modelling protein structures and functions from amino acid sequences. - Liam J. McGuffin; Jennifer D. Atkins; Bajuna R. Salehe; Ahmad N. Shuid; Daniel B. Roche (Nucleic Acids Res., 2015)

DisProt 7.0: a major update of the database of disordered proteins. - Damiano Piovesan; Francesco Tabaro; Ivan Micetic; Marco Necci; Federica Quaglia; Christopher J. Oldfield; Maria Cristina Aspromonte; Norman E. Davey; Radoslav Davidovic; Zsuzsanna Dosztányi; Arne Elofsson; Alessandra Gasparini; et al. (Nucleic Acids Res., 2017)