The Ensembl genome database project. - Tim J. P. Hubbard; Daniel Barker; Ewan Birney; Graham Cameron; Yuan Chen 007; Laura Clarke; Tony Cox 001; James A. Cuff; Val Curwen; Thomas A. Down; Richard Durbin; Eduardo Eyras; et al. (Nucleic Acids Res., 2002)

Ensembl 2002: accommodating comparative genomics. - Michele E. Clamp; T. Daniel Andrews; Daniel Barker; Paul Bevan 001; Graham Cameron; Yuan Chen 007; Laura Clarke; Tony Cox 001; James A. Cuff; Val Curwen; Thomas A. Down; Richard Durbin; et al. (Nucleic Acids Res., 2003)

LVB: parsimony and simulated annealing in the search for phylogenetic trees. - Daniel Barker (Bioinform., 2004)

Predicting Functional Gene Links from Phylogenetic-Statistical Analyses of Whole Genomes. - Daniel Barker; Mark Pagel (PLoS Comput. Biol., 2005)

Constrained models of evolution lead to improved prediction of functional linkage from correlated gain and loss of genes. - Daniel Barker; Andrew Meade; Mark Pagel (Bioinform., 2007)

The evolution of nitrogen fixation in cyanobacteria. - Natasha Latysheva; Vivien L. Junker; William J. Palmer; Geoffrey A. Codd; Daniel Barker (Bioinform., 2012)

4273pi: Bioinformatics education on low cost ARM hardware. - Daniel Barker; David E. K. Ferrier; Peter W. H. Holland; John B. O. Mitchell; Heleen Plaisier; Michael G. Ritchie; Steven D. Smart (BMC Bioinform., 2013)

Xenolog classification. - Charlotte A. Darby; Maureen Stolzer; Patrick J. Ropp; Daniel Barker; Dannie Durand (Bioinform., 2017)

Using sound to understand protein sequence data: new sonification algorithms for protein sequences and multiple sequence alignments. - Edward J. Martin; Thomas R. Meagher; Daniel Barker (BMC Bioinform., 2021)

Bringing bioinformatics to schools with the 4273pi project. - Stevie A. Bain; Heleen Plaisier; Felicity Anderson; Nicola Cook; Kathryn Crouch; Thomas R. Meagher; Michael G. Ritchie; Edward W. J. Wallace; Daniel Barker (PLoS Comput. Biol., 2022)