A semi-implicit solvent model for the simulation of peptides and proteins. - Nathalie Basdevant; Daniel Borgis; Tâp Ha-Duong (J. Comput. Chem., 2004)

A dielectric continuum model of solvation for complex solutes. - Nicolas Levy; Daniel Borgis; Massimo Marchi (Comput. Phys. Commun., 2005)

Combining a polarizable force-field and a coarse-grained polarizable solvent model: Application to long dynamics simulations of bovine pancreatic trypsin inhibitor. - Michel Masella; Daniel Borgis; Philippe Cuniasse (J. Comput. Chem., 2008)

MDVRY: a polarizable classical molecular dynamics package for biomolecules. - M. Souaille; H. Loirat; Daniel Borgis; Marie-Pierre Gaigeot (Comput. Phys. Commun., 2009)

Combining a polarizable force-field and a coarse-grained polarizable solvent model. II. Accounting for hydrophobic effects. - Michel Masella; Daniel Borgis; Philippe Cuniasse (J. Comput. Chem., 2011)

A multiscale coarse-grained polarizable solvent model for handling long tail bulk electrostatics. - Michel Masella; Daniel Borgis; Philippe Cuniasse (J. Comput. Chem., 2013)

Predicting Hydration Free Energies of the FreeSolv Database of Drug-like Molecules with Molecular Density Functional Theory. - Sohvi Luukkonen; Luc Belloni; Daniel Borgis; Maximilien Levesque (J. Chem. Inf. Model., 2020)