Middies: Passive Middleware Abstractions for Pervasive Computing Environments. - Daniel Cutting; Adam Hudson; Aaron J. Quigley (ICPS, 2004)

Implicit Group Messaging over Peer-to-Peer Networks. - Daniel Cutting; Björn Landfeldt; Aaron J. Quigley (Peer-to-Peer Computing, 2006)

AD LOC: Collaborative Location-based Annotation. - Derek J. Corbett; Daniel Cutting (Inf. Media Technol., 2007)

SPICE: Scalable P2P implicit group messaging. - Daniel Cutting; Aaron J. Quigley; Björn Landfeldt (Comput. Commun., 2008)

Serendipity Reloaded. - Daniel Cutting; Aaron J. Quigley (Principles and Applications of Distributed Event-Based Systems, 2010)

Special Interest Messaging: A Comparison of IGM Approaches. - Daniel Cutting; Aaron J. Quigley; Björn Landfeldt (Comput. J., 2010)

Machine learning a manifold. - Sean Craven; Djuna Croon; Daniel Cutting; Rachel Houtz (CoRR, 2021)

Inverse folding for antibody sequence design using deep learning. - Frédéric A. Dreyer; Daniel Cutting; Constantin Schneider; Henry Kenlay; Charlotte M. Deane (CoRR, 2023)

De novo antibody design with SE(3) diffusion. - Daniel Cutting; Frédéric A. Dreyer; David Errington; Constantin Schneider; Charlotte M. Deane (CoRR, 2024)

ABodyBuilder3: Improved and scalable antibody structure predictions. - Henry Kenlay; Frédéric A. Dreyer; Daniel Cutting; Daniel A. Nissley; Charlotte M. Deane (CoRR, 2024)

De Novo Antibody Design with SE(3) Diffusion. - Daniel Cutting; Frédéric A. Dreyer; David Errington; Constantin Schneider; Charlotte M. Deane (J. Comput. Biol., 2025)