VCF-kit: assorted utilities for the variant call format. - Daniel E. Cook; Erik C. Andersen (Bioinform., 2017)

CeNDR, the Caenorhabditis elegans natural diversity resource. - Daniel E. Cook; Stefan Zdraljevic; Joshua P. Roberts; Erik C. Andersen (Nucleic Acids Res., 2017)

Knowledge distillation for fast and accurate DNA sequence correction. - Anastasiya Belyaeva; Joel Shor; Daniel E. Cook; Kishwar Shafin; Daniel Liu; Armin Töpfer; Aaron M. Wenger; William J. Rowell; Howard Yang; Alexey Kolesnikov; Cory Y. McLean; Maria Nattestad; et al. (CoRR, 2022)