Toward Community Standards and Software for Whole-Cell Modeling. - Dagmar Waltemath; Jonathan R. Karr; Frank T. Bergmann; Vijayalakshmi Chelliah; Michael Hucka; Marcus Krantz; Wolfram Liebermeister; Pedro Mendes 001; Chris J. Myers; Pinar Pir; Begum Alaybeyoglu; Naveen K. Aranganathan; et al. (IEEE Trans. Biomed. Eng., 2016)

redGEM: Systematic reduction and analysis of genome-scale metabolic reconstructions for development of consistent core metabolic models. - Meriç Ataman; Daniel F. Hernandez Gardiol; Georgios Fengos; Vassily Hatzimanikatis (PLoS Comput. Biol., 2017)