iBBiG: iterative binary bi-clustering of gene sets. - Daniel Gusenleitner; Eleanor Howe; Stefan Bentink; John Quackenbush; Aedín C. Culhane (Bioinform., 2012)

GeneSigDB: a manually curated database and resource for analysis of gene expression signatures. - Aedín C. Culhane; Markus S. Schröder; Razvan Sultana; Shaita C. Picard; Enzo N. Martinelli; Caroline Kelly; Benjamin Haibe-Kains; Misha Kapushesky; Anne-Alyssa St Pierre; William Flahive; Kermshlise C. Picard; Daniel Gusenleitner; et al. (Nucleic Acids Res., 2012)

RamiGO: an R/Bioconductor package providing an AmiGO Visualize interface. - Markus S. Schröder; Daniel Gusenleitner; John Quackenbush; Aedín C. Culhane; Benjamin Haibe-Kains (Bioinform., 2013)

ASSIGN: context-specific genomic profiling of multiple heterogeneous biological pathways. - Ying Shen; Mumtahena Rahman; Stephen R. Piccolo; Daniel Gusenleitner; Nader N. El-Chaar; Luis Cheng; Stefano Monti; Andrea H. Bild; W. Evan Johnson (Bioinform., 2015)

Developing genomic models for cancer prevention and treatment stratification - Daniel Gusenleitner (2016)