Daniel J. Wilson

According to our database, Daniel J. Wilson authored at least 10 papers between 2013 and 2021.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2021

Probabilistic transmission models incorporating sequencing data for healthcare-associated Clostridioides difficile outperform heuristic rules and identify strain-specific differences in transmission.

David W. Eyre, Mirjam Laager, A. Sarah Walker, Ben S. Cooper, Daniel J. Wilson

PLoS Comput. Biol., 2021

2020

Sequential Monte Carlo with transformations.

Richard G. Everitt, Richard Culliford, Felipe J. Medina-Aguayo, Daniel J. Wilson

Stat. Comput., 2020

2019

DeepAMR for predicting co-occurrent resistance of Mycobacterium tuberculosis.

Yang Yang, Timothy M. Walker, A. Sarah Walker, Daniel J. Wilson, Timothy E. A Peto, Derrick W. Crook, Farah Shamout, CRyPTIC Consortium, Tingting Zhu, David A. Clifton

Bioinform., 2019

Application of machine learning techniques to tuberculosis drug resistance analysis.

Samaneh Kouchaki, Yang Yang, Timothy M. Walker, A. Sarah Walker, Daniel J. Wilson, Timothy E. A Peto, Derrick W. Crook, CRyPTIC Consortium, David A. Clifton

Bioinform., 2019

2018

Bayesian reconstruction of transmission within outbreaks using genomic variants.

Nicola De Maio, Colin J. Worby, Daniel J. Wilson, Nicole Stoesser

PLoS Comput. Biol., 2018

Machine learning for classifying tuberculosis drug-resistance from DNA sequencing data.

Yang Yang, Katherine E. Niehaus, Timothy M. Walker, Zamin Iqbal, A. Sarah Walker, Daniel J. Wilson, Tim E. A. Peto, Derrick W. Crook, E. Grace Smith, Tingting Zhu, David A. Clifton

Bioinform., 2018

2016

SCOTTI: Efficient Reconstruction of Transmission within Outbreaks with the Structured Coalescent.

Nicola De Maio, Chieh-Hsi Wu, Daniel J. Wilson

PLoS Comput. Biol., 2016

Practical Approaches for Detecting Selection in Microbial Genomes.

Jessica Hedge, Daniel J. Wilson

PLoS Comput. Biol., 2016

2015

ClonalFrameML: Efficient Inference of Recombination in Whole Bacterial Genomes.

Xavier Didelot, Daniel J. Wilson

PLoS Comput. Biol., 2015

2013

Detection of Mixed Infection from Bacterial Whole Genome Sequence Data Allows Assessment of Its Role in <i>Clostridium difficile</i> Transmission.

David W. Eyre, Madeleine L. Cule, David Griffiths, Derrick W. Crook, Tim E. A. Peto, A. Sarah Walker, Daniel J. Wilson

PLoS Comput. Biol., 2013