A New Approach for Gene Annotation Using Unambiguous Sequence Joining. - Alexandre Tchourbanov; Daniel Quest; Hesham H. Ali; Mark A. Pauley; Robert B. Norgren (CSB, 2003)

Ontology Specific Data Mining Based on Dynamic Grammars. - Daniel Quest; Hesham H. Ali (CSB, 2004)

A Grammar Based Approach for Mining Bioinformatics Databases. - Daniel Quest; Hesham H. Ali (HICSS, 2005)

A method of precise mRNA/DNA homology-based gene structure prediction. - Alexander G. Churbanov; Mark A. Pauley; Daniel Quest; Hesham H. Ali (BMC Bioinform., 2005)

A parallel architecture for regulatory motif algorithm assessment. - Daniel Quest; Kathryn Dempsey; Mohammad Shafiullah; Dhundy Bastola; Hesham H. Ali (IPDPS, 2008)

MTAP: The Motif Tool Assessment Platform. - Daniel Quest; Kathryn Dempsey; Mohammad Shafiullah; Dhundy Bastola; Hesham H. Ali (BMC Bioinform., 2008)

Next generation models for storage and representation of microbial biological annotation. - Daniel Quest; Miriam L. Land; Thomas S. Brettin; Robert W. Cottingham (BMC Bioinform., 2010)

Poster: a novel architecture for biothreat situation awareness. - Thomas S. Brettin; Laura Pullum; Daniel Quest; Xiaohui Cui; Songhua Xu; Richard Stouder (SC Companion, 2011)

Scenario driven data modelling: a method for integrating diverse sources of data and data streams. - Shelton D. Griffith; Daniel Quest; Thomas S. Brettin; Robert W. Cottingham (BMC Bioinform., 2011)

Improving Patient Selection and Prioritization for Hospital at Home Through Predictive Modeling. - Satyabrata Pati; Gina Thompson; Chritopher Mull; Jacey Fazio; Daniel Allen; Heidi Felix; Margaret R. Paulson; Rajeev Chaudhry; Gautam Matcha; Michael J. Maniaci; Charles Burger; Daniel Quest (AMIA, 2022)