A Practical and Efficient Algorithm for the k-mismatch Shortest Unique Substring Finding Problem. - Daniel R. Allen; Sharma V. Thankachan; Bojian Xu (BCB, 2018)

Accuracy assessment for the co-registration between optical and VIVE head-mounted display tracking. - Leah A. Groves; Patrick Carnahan; Daniel R. Allen; Adam Rankin; Terry M. Peters; Elvis C. S. Chen (Int. J. Comput. Assist. Radiol. Surg., 2019)

Miniature C-arm simulator using wireless accelerometer based tracking. - Daniel R. Allen; John Moore 001; Abigayel Joschko; Collin Clarke; Terry M. Peters; Elvis C. S. Chen (Image-Guided Procedures, 2020)

An Ultra-Fast and Parallelizable Algorithm for Finding $k$k-Mismatch Shortest Unique Substrings. - Daniel R. Allen; Sharma V. Thankachan; Bojian Xu (IEEE ACM Trans. Comput. Biol. Bioinform., 2021)

Unified Calibration Technique for Augmented-Reality Ultrasound-Guided Interventions. - Elvis C. S. Chen; Daniel R. Allen; Joeana Cambranis Romero; Terry M. Peters (MetroXRAINE, 2022)

A co-calibration framework for the accuracy assessment of vision-based tracking systems. - Daniel R. Allen; Terry M. Peters; Elvis C. S. Chen (Image-Guided Procedures, 2022)

Towards virtual displays in the interventional radiology suite: a feasibility study. - Daniel R. Allen; Nadia Cattari; Joeana Cambranis Romero; Terry M. Peters; Elvis C. S. Chen (Image-Guided Procedures, 2023)

Open source video-based hand-eye calibration. - Tara N. Kemper; Daniel R. Allen; Adam Rankin; Terry M. Peters; Elvis C. S. Chen (Image-Guided Procedures, 2023)

Development and evaluation of an open-source virtual reality C-Arm simulator. - Daniel R. Allen; Collin Clarke; Terry M. Peters; Elvis C. S. Chen (Comput. methods Biomech. Biomed. Eng. Imaging Vis., 2023)

Enhancing surgical navigation: a robust hand-eye calibration method for the Microsoft HoloLens 2. - Daniel R. Allen; Terry M. Peters; Elvis C. S. Chen (Int. J. Comput. Assist. Radiol. Surg., 2025)