Mapping the functional connectivity of anterior cingulate cortex. - Daniel S. Margulies; Clare Kelly; Lucina Q. Uddin; Bharat B. Biswal; F. Xavier Castellanos; Michael P. Milham (NeuroImage, 2007)

Functional connectivity of the human amygdala using resting state fMRI. - Amy Krain Roy; Zarrar Shehzad; Daniel S. Margulies; Clare Kelly; Lucina Q. Uddin; Kristin Gotimer; Bharat B. Biswal; F. Xavier Castellanos; Michael P. Milham (NeuroImage, 2009)

Delineating self-referential processing from episodic memory retrieval: Common and dissociable networks. - Bastian Sajonz; Thorsten Kahnt; Daniel S. Margulies; Soyoung Q. Park; André Wittmann; Meline Stoy; Andreas Ströhle; Andreas Heinz; Georg Northoff; Felix Bermpohl (NeuroImage, 2010)

Low frequency fluctuations reveal integrated and segregated processing among the cerebral hemispheres. - Dylan G. Gee; Bharat B. Biswal; Clare Kelly; David E. Stark; Daniel S. Margulies; Zarrar Shehzad; Lucina Q. Uddin; Donald F. Klein; Marie T. Banich; F. Xavier Castellanos; Michael P. Milham (NeuroImage, 2011)

Long-term effects of motor training on resting-state networks and underlying brain structure. - Marco Taubert; Gabriele Lohmann; Daniel S. Margulies; Arno Villringer; Patrick Ragert (NeuroImage, 2011)

Fifty Shades of Gray, Matter: Using Bayesian Priors to Improve the Power of Whole-Brain Voxel- and Connexelwise Inferences. - Krzysztof J. Gorgolewski; Pierre-Louis Bazin; Haakon G. Engen; Daniel S. Margulies (PRNI, 2013)

Functional Connectivity Glyphs for Brain Visualization. - Joachim Böttger; Ralph Schurade; Daniel S. Margulies (VMLS@EuroVis (Short Papers), 2013)

Overlapping and parallel cerebello-cerebral networks contributing to sensorimotor control: An intrinsic functional connectivity study. - Judy A. Kipping; Wolfgang Grodd; Vinod Kumar; Marco Taubert; Arno Villringer; Daniel S. Margulies (NeuroImage, 2013)

Visualizing the human connectome. - Daniel S. Margulies; Joachim Böttger; Aimi Watanabe; Krzysztof J. Gorgolewski (NeuroImage, 2013)

Common intrinsic connectivity states among posteromedial cortex subdivisions: Insights from analysis of temporal dynamics. - Zhen Yang; R. Cameron Craddock; Daniel S. Margulies; Chao-Gan Yan; Michael P. Milham (NeuroImage, 2014)

Three-Dimensional Mean-Shift Edge Bundling for the Visualization of Functional Connectivity in the Brain. - Joachim Böttger; Alexander Schäfer 002; Gabriele Lohmann; Arno Villringer; Daniel S. Margulies (IEEE Trans. Vis. Comput. Graph., 2014)

NeuroVault.org: a web-based repository for collecting and sharing unthresholded statistical maps of the human brain. - Krzysztof J. Gorgolewski; Gaël Varoquaux; Gabriel Rivera; Yannick Schwartz; Satrajit S. Ghosh; Camille Maumet; Vanessa V. Sochat; Thomas E. Nichols; Russell A. Poldrack; Jean-Baptiste Poline; Tal Yarkoni; Daniel S. Margulies (Frontiers Neuroinformatics, 2015)

Individual differences in common factors of emotional traits and executive functions predict functional connectivity of the amygdala. - Christiane S. Rohr; F. R. Dreyer; Idan M. Aderka; Daniel S. Margulies; Stefan Frisch; Arno Villringer; Hadas Okon-Singer (NeuroImage, 2015)

Using executive control training to suppress amygdala reactivity to aversive information. - Noga Cohen; Daniel S. Margulies; Sarit Ashkenazi; Andreas Schäfer 003; Marco Taubert; Avishai Henik; Arno Villringer; Hadas Okon-Singer (NeuroImage, 2016)

NeuroVault.org: A repository for sharing unthresholded statistical maps, parcellations, and atlases of the human brain. - Krzysztof J. Gorgolewski; Gaël Varoquaux; Gabriel Rivera; Yannick Schwartz; Vanessa V. Sochat; Satrajit S. Ghosh; Camille Maumet; Thomas E. Nichols; Jean-Baptiste Poline; Tal Yarkoni; Daniel S. Margulies; Russell A. Poldrack (NeuroImage, 2016)

Longitudinal changes in resting-state fMRI from age 5 to age 6 years covary with language development. - Yaqiong Xiao; Angela D. Friederici; Daniel S. Margulies; Jens Brauer (NeuroImage, 2016)

Nipype: a flexible, lightweight and extensible neuroimaging data processing framework in Python. 0.12.0-rc1. - Krzysztof J. Gorgolewski; Oscar Esteban; Christopher Burns 002; Erik Ziegler; Basile Pinsard; Cindee M. Madison; Michael L. Waskom; David Gage Ellis; Dav Clark; Michael Dayan; Alexandre Manhães-Savio; Michael Philipp Notter; et al. (Zenodo, 2016)

The Neuro Bureau ADHD-200 Preprocessed repository. - Pierre Bellec; Carlton Chu; François Chouinard-Decorte; Yassine Benhajali; Daniel S. Margulies; R. Cameron Craddock (NeuroImage, 2017)

In need of constraint: Understanding the role of the cingulate cortex in the impulsive mind. - Johannes Golchert; Jonathan Smallwood; Elizabeth Jefferies; Franziskus Liem; Julia M. Huntenburg; Marcel Falkiewicz; Mark E. Lauckner; Sabine Oligschläger; Arno Villringer; Daniel S. Margulies (NeuroImage, 2017)

Individual variation in intentionality in the mind-wandering state is reflected in the integration of the default-mode, fronto-parietal, and limbic networks. - Johannes Golchert; Jonathan Smallwood; Elizabeth Jefferies; Paul Seli; Julia M. Huntenburg; Franziskus Liem; Mark E. Lauckner; Sabine Oligschläger; Boris C. Bernhardt; Arno Villringer; Daniel S. Margulies (NeuroImage, 2017)

Predicting brain-age from multimodal imaging data captures cognitive impairment. - Franziskus Liem; Gaël Varoquaux; Jana Kynast; Frauke Beyer; Shahrzad Kharabian Masouleh; Julia M. Huntenburg; Leonie Lampe; Mehdi Rahim; Alexandre Abraham; R. Cameron Craddock; Steffi Riedel-Heller; Tobias Luck; et al. (NeuroImage, 2017)

Nipype: a flexible, lightweight and extensible neuroimaging data processing framework in Python. 0.13.0. - Krzysztof J. Gorgolewski; Oscar Esteban; Christopher Burns 002; Erik Ziegler; Basile Pinsard; Cindee M. Madison; Michael L. Waskom; David Gage Ellis; Dav Clark; Jason Wong; Michael Dayan; Alexandre Manhães-Savio; et al. (Zenodo, 2017)

Automated individual-level parcellation of Broca's region based on functional connectivity. - Estrid Jakobsen; Franziskus Liem; Manousos A. Klados; Seyma Bayrak; Michael Petrides; Daniel S. Margulies (NeuroImage, 2018)

Trade-off of cerebello-cortical and cortico-cortical functional networks for planning in 6-year-old children. - Judy A. Kipping; Daniel S. Margulies; Simon B. Eickhoff; Annie Lee; Anqi Qiu (NeuroImage, 2018)

Distant from input: Evidence of regions within the default mode network supporting perceptually-decoupled and conceptually-guided cognition. - Charlotte Murphy; Elizabeth Jefferies; Shirley-Ann Rüschemeyer; Mladen Sormaz; Hao-Ting Wang; Daniel S. Margulies; Jonathan Smallwood (NeuroImage, 2018)

Patterns of thought: Population variation in the associations between large-scale network organisation and self-reported experiences at rest. - Hao-Ting Wang; Danilo Bzdok; Daniel S. Margulies; R. Cameron Craddock; Michael P. Milham; Elizabeth Jefferies; Jonathan Smallwood (NeuroImage, 2018)

Individual variation in patterns of task focused, and detailed, thought are uniquely associated within the architecture of the medial temporal lobe. - Nerissa Siu Ping Ho; Xiuyi Wang; Deniz Vatansever; Daniel S. Margulies; Boris C. Bernhardt; Elizabeth Jefferies; Jonathan Smallwood (NeuroImage, 2019)

Modes of operation: A topographic neural gradient supporting stimulus dependent and independent cognition. - Charlotte Murphy; Hao-Ting Wang; Delali Konu; Rebecca Lowndes; Daniel S. Margulies; Elizabeth Jefferies; Jonathan Smallwood (NeuroImage, 2019)

The ebb and flow of attention: Between-subject variation in intrinsic connectivity and cognition associated with the dynamics of ongoing experience. - Adam Turnbull; Hao-Ting Wang; Jonathan W. Schooler; Elizabeth Jefferies; Daniel S. Margulies; Jonathan Smallwood (NeuroImage, 2019)

Connectome Smoothing via Low-Rank Approximations. - Runze Tang; Michael D. Ketcha; Alexandra Badea; Evan D. Calabrese; Daniel S. Margulies; Joshua T. Vogelstein; Carey E. Priebe; Daniel L. Sussman (IEEE Trans. Medical Imaging, 2019)

nipy/nipype: 1.3.0-rc1. - Oscar Esteban; Christopher J. Markiewicz; Dorota Jarecka; Erik Ziegler; Hans J. Johnson; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hämäläinen; Michael Philipp Notter; Benjamin Yvernault; David Gage Ellis; Taylor Salo; et al. (Zenodo, 2019)

nipy/nipype: 1.3.0. - Oscar Esteban; Christopher J. Markiewicz; Dorota Jarecka; Erik Ziegler; Hans J. Johnson; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hämäläinen; Michael Philipp Notter; Benjamin Yvernault; David Gage Ellis; Taylor Salo; et al. (Zenodo, 2019)

nipy/nipype: 1.4.0. - Oscar Esteban; Christopher J. Markiewicz; Christopher Burns 002; Hans J. Johnson; Erik Ziegler; Alexandre Manhães-Savio; Dorota Jarecka; David Gage Ellis; Benjamin Yvernault; Carlo Hämäläinen; Michael Philipp Notter; Taylor Salo; et al. (Zenodo, 2019)

Toward a connectivity gradient-based framework for reproducible biomarker discovery. - Seok-Jun Hong; Ting Xu 001; Aki Nikolaidis; Jonathan Smallwood; Daniel S. Margulies; Boris C. Bernhardt; Joshua T. Vogelstein; Michael P. Milham (NeuroImage, 2020)

The role of default mode network in semantic cue integration. - Lucilla Lanzoni; Daniela Ravasio; Hannah Thompson; Deniz Vatansever; Daniel S. Margulies; Jonathan Smallwood; Elizabeth Jefferies (NeuroImage, 2020)

The relationship between individual variation in macroscale functional gradients and distinct aspects of ongoing thought. - Brontë Mckeown; Will H. Strawson; Hao-Ting Wang; Theodoros Karapanagiotidis; Reinder Vos de Wael; Oualid M. Benkarim; Adam Turnbull; Daniel S. Margulies; Elizabeth Jefferies; Cade McCall; Boris C. Bernhardt; Jonathan Smallwood (NeuroImage, 2020)

Joint embedding: A scalable alignment to compare individuals in a connectivity space. - Karl-Heinz Nenning; Ting Xu 001; Ernst Schwartz; Jesús Arroyo 001; Adelheid Woehrer; Alexandre R. Franco; Joshua T. Vogelstein; Daniel S. Margulies; Hesheng Liu; Jonathan Smallwood; Michael P. Milham; Georg Langs (NeuroImage, 2020)

A gradient from long-term memory to novel cognition: Transitions through default mode and executive cortex. - Xiuyi Wang; Daniel S. Margulies; Jonathan Smallwood; Elizabeth Jefferies (NeuroImage, 2020)

Cross-species functional alignment reveals evolutionary hierarchy within the connectome. - Ting Xu 001; Karl-Heinz Nenning; Ernst Schwartz; Seok-Jun Hong; Joshua T. Vogelstein; Alexandros Goulas; Damien A. Fair; Charles E. Schroeder; Daniel S. Margulies; Jonny Smallwood; Michael P. Milham; Georg Langs (NeuroImage, 2020)

nipy/nipype: 1.4.1. - Oscar Esteban; Christopher J. Markiewicz; Hans J. Johnson; Erik Ziegler; Alexandre Manhães-Savio; Dorota Jarecka; Christopher Burns 002; David Gage Ellis; Carlo Hämäläinen; Michael Philipp Notter; Benjamin Yvernault; Taylor Salo; et al. (Zenodo, 2020)

nipy/nipype: 1.4.2. - Oscar Esteban; Christopher J. Markiewicz; Hans J. Johnson; Erik Ziegler; Alexandre Manhães-Savio; Dorota Jarecka; Christopher Burns 002; David Gage Ellis; Carlo Hämäläinen; Michael Philipp Notter; Benjamin Yvernault; Taylor Salo; et al. (Zenodo, 2020)

nipy/nipype: 1.5.0. - Oscar Esteban; Christopher J. Markiewicz; Christopher Burns 002; Mathias Goncalves; Dorota Jarecka; Erik Ziegler; Shoshana Berleant; David Gage Ellis; Basile Pinsard; Cindee Madison; Michael Waskom; Michael Philipp Notter; et al. (Zenodo, 2020)

nipy/nipype: 1.5.1. - Oscar Esteban; Christopher J. Markiewicz; Christopher Burns 002; Mathias Goncalves; Dorota Jarecka; Erik Ziegler; Shoshana Berleant; David Gage Ellis; Basile Pinsard; Cindee Madison; Michael Waskom; Michael Philipp Notter; et al. (Zenodo, 2020)

Imaging evolution of the primate brain: the next frontier? - Patrick Friedrich; Stephanie J. Forkel; Céline Amiez; Joshua H. Balsters; Olivier Coulon; Lingzhong Fan; Alexandros Goulas; Fadila Hadj-Bouziane; Erin E. Hecht; Katja Heuer; Tianzi Jiang; Robert D. Latzman; et al. (NeuroImage, 2021)

Signal diffusion along connectome gradients and inter-hub routing differentially contribute to dynamic human brain function. - Bo-yong Park; Reinder Vos de Wael; Casey Paquola; Sara Larivière; Oualid M. Benkarim; Jessica Royer; Shahin Tavakol; Raúl Rodríguez-Cruces; Qiongling Li; Sofie L. Valk; Daniel S. Margulies; Bratislav Misic; et al. (NeuroImage, 2021)

The impact of early musical training on striatal functional connectivity. - Floris Tijmen van Vugt; Karl Hartmann; Eckart Altenmüller; Bahram Mohammadi; Daniel S. Margulies (NeuroImage, 2021)

nipy/nipype: 1.7.0. - Oscar Esteban; Christopher J. Markiewicz; Christopher Burns 002; Mathias Goncalves; Dorota Jarecka; Erik Ziegler; Shoshana Berleant; David Gage Ellis; Basile Pinsard; Cindee Madison; Michael Waskom; Michael Philipp Notter; et al. (Zenodo, 2021)

Gradients in brain organization. - Boris C. Bernhardt; Jonathan Smallwood; Shella D. Keilholz; Daniel S. Margulies (NeuroImage, 2022)

Disentangling cortical functional connectivity strength and topography reveals divergent roles of genes and environment. - Bianca Burger; Karl-Heinz Nenning; Ernst Schwartz; Daniel S. Margulies; Alexandros Goulas; Hesheng Liu; Simon Neubauer; Justin Dauwels; Daniela Prayer; Georg Langs (NeuroImage, 2022)

nipy/nipype: 1.7.1. - Oscar Esteban; Christopher J. Markiewicz; Christopher Burns 002; Mathias Goncalves; Dorota Jarecka; Erik Ziegler; Shoshana Berleant; David Gage Ellis; Basile Pinsard; Cindee Madison; Michael Waskom; Michael Philipp Notter; et al. (Zenodo, 2022)

nipy/nipype: 1.8.0. - Oscar Esteban; Christopher J. Markiewicz; Christopher Burns 002; Mathias Goncalves; Dorota Jarecka; Erik Ziegler; Shoshana Berleant; David Gage Ellis; Basile Pinsard; Cindee Madison; Michael Waskom; Michael Philipp Notter; et al. (Zenodo, 2022)

nipy/nipype: 1.8.1. - Oscar Esteban; Christopher J. Markiewicz; Christopher Burns 002; Mathias Goncalves; Dorota Jarecka; Erik Ziegler; Shoshana Berleant; David Gage Ellis; Basile Pinsard; Cindee Madison; Michael Waskom; Michael Philipp Notter; et al. (Zenodo, 2022)

nipy/nipype: 1.8.3. - Oscar Esteban; Christopher J. Markiewicz; Christopher Burns 002; Mathias Goncalves; Dorota Jarecka; Erik Ziegler; Shoshana Berleant; David Gage Ellis; Basile Pinsard; Cindee Madison; Michael Waskom; Michael Philipp Notter; et al. (Zenodo, 2022)

Omnipresence of the sensorimotor-association axis topography in the human connectome. - Karl-Heinz Nenning; Ting Xu 001; Alexandre R. Franco; Khena M. Swallow; Arielle Tambini; Daniel S. Margulies; Jonathan Smallwood; Stanley J. Colcombe; Michael P. Milham (NeuroImage, 2023)

Cortical gradients during naturalistic processing are hierarchical and modality-specific. - Ahmad Samara; Jeffrey Eilbott; Daniel S. Margulies; Ting Xu 001; Tamara Vanderwal (NeuroImage, 2023)

Gradients of Brain Organization: Smooth Sailing from Methods Development to User Community. - Jessica Royer; Casey Paquola; Sofie L. Valk; Matthias Kirschner; Seok-Jun Hong; Bo-yong Park; Richard A. I. Bethlehem; Robert Leech; B. T. Thomas Yeo; Elizabeth Jefferies; Jonathan Smallwood; Daniel S. Margulies; et al. (Neuroinformatics, 2024)