ComPPI: a cellular compartment-specific database for protein-protein interaction network analysis. - Dániel V. Veres; Dávid M. Gyurkó; Benedek Thaler; Kristof Z. Szalay; Dávid Fazekas; Tamás Korcsmáros; Peter Csermely (Nucleic Acids Res., 2015)

The EntOptLayout Cytoscape plug-in for the efficient visualization of major protein complexes in protein-protein interaction and signalling networks. - Bence Ágg; Andrea Császár; Máté Szalay-Beko; Dániel V. Veres; Réka Mizsei; Péter Ferdinandy; Péter Csermely; István A. Kovács (Bioinform., 2019)

Translocatome: a novel resource for the analysis of protein translocation between cellular organelles. - Péter Mendik; Levente Dobronyi; Ferenc Hári; Csaba Kerepesi; Leonardo Maia-Moço; Donát Buszlai; Peter Csermely; Dániel V. Veres (Nucleic Acids Res., 2019)

Learning of signaling networks: molecular mechanisms. - Péter Csermely; Nina Kunsic; Péter Mendik; Márk Kerestély; Teodóra Faragó; Dániel V. Veres; Peter Tompa (CoRR, 2020)