scPipe: A flexible R/Bioconductor preprocessing pipeline for single-cell RNA-sequencing data. - Luyi Tian; Shian Su; Xueyi Dong; Daniela Amann-Zalcenstein; Christine Biben; Azadeh Seidi; Douglas J. Hilton; Shalin H. Naik; Matthew E. Ritchie (PLoS Comput. Biol., 2018)

Transcriptomic Profiling of Human Pluripotent Stem Cell-derived Retinal Pigment Epithelium over Time. - Grace E. Lidgerwood; Anne Senabouth; Casey J. A. Smith-Anttila; Vikkitharan Gnanasambandapillai; Dominik C. Kaczorowski; Daniela Amann-Zalcenstein; Erica L. Fletcher; Shalin H. Naik; Alex W. Hewitt; Joseph E. Powell; Alice Pébay (Genom. Proteom. Bioinform., 2021)