BioNet: an R-Package for the functional analysis of biological networks. - Daniela Beisser; Gunnar W. Klau; Thomas Dandekar; Tobias Müller 001; Marcus T. Dittrich (Bioinform., 2010)

Robustness and accuracy of functional modules in integrated network analysis. - Daniela Beisser; Stefan Brunkhorst; Thomas Dandekar; Gunnar W. Klau; Marcus T. Dittrich; Tobias Müller 001 (Bioinform., 2012)

Integrated pathway modules using time-course metabolic profiles and EST data from Milnesium tardigradum. - Daniela Beisser; Markus A. Grohme; Joachim Kopka; Marcus Frohme; Ralph O. Schill; Steffen Hengherr; Thomas Dandekar; Gunnar W. Klau; Marcus T. Dittrich; Tobias Müller 001 (BMC Syst. Biol., 2012)

xHeinz: an algorithm for mining cross-species network modules under a flexible conservation model. - Mohammed El-Kebir; Hayssam Soueidan; Thomas Hume; Daniela Beisser; Marcus T. Dittrich; Tobias Müller 001; Guillaume Blin; Jaap Heringa; Macha Nikolski; Lodewyk F. A. Wessels; Gunnar W. Klau (Bioinform., 2015)

Natrix: a Snakemake-based workflow for processing, clustering, and taxonomically assigning amplicon sequencing reads. - Marius Welzel; Anja Lange; Dominik Heider; Michael Schwarz 009; Bernd Freisleben; Manfred Jensen; Jens Boenigk; Daniela Beisser (BMC Bioinform., 2020)