Ontological Modelling for Neurovascular Disease Study: Issues in the Adoption of Description Logic. - Gianluca Colombo; Daniele Merico; Marco Antoniotti; Flavio De Paoli; Giancarlo Mauri (Description Logics, 2007)

Discovering Relations Among GO-Annotated Clusters by Graph Kernel Methods. - Italo Zoppis; Daniele Merico; Marco Antoniotti; Bud Mishra; Giancarlo Mauri (ISBRA, 2007)

Evaluating Graph Kernel Methods for Relation Discovery in GO-Annotated Clusters. - Daniele Merico; Italo Zoppis; Marco Antoniotti; Giancarlo Mauri (KES (3), 2007)

Reference Ontology Design for a Neurovascular Knowledge Network. - Gianluca Colombo; Daniele Merico; Giancarlo Mauri (MTSR, 2007)

Ontological modeling at a domain interface: bridging clinical and biomolecular knowledge. - Gianluca Colombo; Daniele Merico; Zoltán Nagy 004; Flavio De Paoli; Marco Antoniotti; Giancarlo Mauri (Knowl. Eng. Rev., 2009)

An application of kernel methods to gene cluster temporal meta-analysis. - Marco Antoniotti; Marco Carreras; Antonella Farinaccio; Giancarlo Mauri; Daniele Merico; Italo Zoppis (Comput. Oper. Res., 2010)

An ontological modeling approach to cerebrovascular disease studies: The NEUROWEB case. - Gianluca Colombo; Daniele Merico; Giorgio Boncoraglio; Flavio De Paoli; John Ellul; Giuseppe Frisoni; Zoltán Nagy 004; Aad van der Lugt; István Vassányi; Marco Antoniotti (J. Biomed. Informatics, 2010)

WordCloud: a Cytoscape plugin to create a visual semantic summary of networks. - Layla Oesper; Daniele Merico; Ruth Isserlin; Gary D. Bader (Source Code Biol. Medicine, 2011)

Enrichment Map - a Cytoscape app to visualize and explore OMICs pathway enrichment results. - Ruth Isserlin; Daniele Merico; Veronique Voisin; Gary D. Bader (F1000Research, 2014)