Galaxy CloudMan: delivering cloud compute clusters. - Enis Afgan; Dannon Baker; Nathan Coraor; Brad Chapman; Anton Nekrutenko; James Taylor 001 (BMC Bioinform., 2010)

Galaxy: A Gateway to Tools in e-Science. - Enis Afgan; Jeremy Goecks; Dannon Baker; Nate Coraor; Anton Nekrutenko; James Taylor 001 (Guide to e-Science, 2011)

A reference model for deploying applications in virtualized environments. - Enis Afgan; Dannon Baker; Anton Nekrutenko; James Taylor 001 (Concurr. Comput. Pract. Exp., 2012)

Galaxy cluster to cloud - genomics at scale. - Enis Afgan; Dannon Baker; John Chilton; Nathan Coraor; James Taylor 001 (GCE@SC, 2014)

Enabling cloud bursting for life sciences within Galaxy. - Enis Afgan; Nathan Coraor; John Chilton; Dannon Baker; James Taylor 001; The Galaxy Team (Concurr. Comput. Pract. Exp., 2015)

A guide and best practices for R/Bioconductor tool integration in Galaxy. - Nitesh Turaga; Mallory Ann Freeberg; Dannon Baker; John Chilton; The Galaxy Team; Anton Nekrutenko; James Taylor 001 (F1000Research, 2016)

The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2016 update. - Enis Afgan; Dannon Baker; Marius van den Beek; Daniel J. Blankenberg; Dave Bouvier; Martin Cech; John Chilton; Dave Clements; Nate Coraor; Carl Eberhard; Björn A. Grüning; Aysam Guerler; et al. (Nucleic Acids Res., 2016)

The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 update. - Enis Afgan; Dannon Baker; Bérénice Batut; Marius van den Beek; Dave Bouvier; Martin Cech; John Chilton; Dave Clements; Nate Coraor; Björn A. Grüning; Aysam Guerler; Jennifer Hillman-Jackson; et al. (Nucleic Acids Res., 2018)

Experiences with Integrating Custos SecurityServices. - Isuru Ranawaka; Samitha Liyanage; Dannon Baker; Alexandru Mahmoud; Juleen Graham; Terry Fleury; Dimuthu Wannipurage; Yu Ma; Enis Afgan; Jim Basney; Suresh Marru; Marlon E. Pierce (CoRR, 2021)

The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2022 update. - Enis Afgan; Anton Nekrutenko; Björn A. Grüning; Daniel J. Blankenberg; Jeremy Goecks; Michael C. Schatz; Alexander E. Ostrovsky; Alexandru Mahmoud; Andrew J. Lonie; Anna Syme; Anne Fouilloux; Anthony Bretaudeau; et al. (Nucleic Acids Res., 2022)

Fast and accurate genome-wide predictions and structural modeling of protein-protein interactions using Galaxy. - Aysam Guerler; Dannon Baker; Marius van den Beek; Björn A. Grüning; Dave Bouvier; Nate Coraor; Stephen D. Shank; Jordan D. Zehr; Michael C. Schatz; Anton Nekrutenko (BMC Bioinform., 2023)