Genetic sequence matching using D4M big data approaches. - Stephanie Dodson; Darrell O. Ricke; Jeremy Kepner (HPEC, 2014)

Dawn: Rapid large-scale protein multiple sequence alignment and conservation analysis. - Darrell O. Ricke; Anna Shcherbina (HPEC, 2015)

Vocal biomarkers to discriminate cognitive load in a working memory task. - Thomas F. Quatieri; James R. Williamson; Christopher J. Smalt; Tejash Patel; Joseph Perricone; Daryush D. Mehta; Brian S. Helfer; Gregory A. Ciccarelli; Darrell O. Ricke; Nicolas Malyska; Jeff Palmer; Kristin Heaton; et al. (INTERSPEECH, 2015)

Using a Big Data Database to Identify Pathogens in Protein Data Space. - Ashley Mae Conard; Stephanie Dodson; Jeremy Kepner; Darrell O. Ricke (CoRR, 2015)

FastID: Extremely fast forensic DNA comparisons. - Darrell O. Ricke (HPEC, 2017)

A linear algebra approach to fast DNA mixture analysis using GPUs. - Siddharth Samsi; Brian S. Helfer; Jeremy Kepner; Albert Reuther; Darrell O. Ricke (HPEC, 2017)

Fast P(RMNE): Fast forensic DNA probability of random man not excluded calculation. - Darrell O. Ricke; Steven Schwartz (F1000Research, 2017)

Large-Scale Bayesian Kinship Analysis. - Siddharth Samsi; Bea Yu; Darrell O. Ricke; Philip Fremont-Smith; Jeremy Kepner; Albert Reuther (HPEC, 2018)

IdPrism: Rapid Analysis of Forensic DNA Samples Using MPS SNP Profiles. - Darrell O. Ricke; James Watkins; Philip Fremont-Smith; Adam Michaleas (HPEC, 2019)

Parallel Computing with DNA Forensics Data. - Adam Michaleas; Philip Fremont-Smith; Chelsea Lennartz; Darrell O. Ricke (HPEC, 2022)

Scalable and Portable Pipelines for Predicting 3D Protein Structures on Standalone and HPC Systems. - Adam Michaleas; Darrell O. Ricke (HPEC, 2023)

LLMs for Closed-Library Multi-Document Query, Test Generation, and Evaluation. - Claire Randolph; Adam Michaleas; Darrell O. Ricke (HPEC, 2024)