Texture Analysis of Virtual Slides for Grading Dysplasia in Barretts Oesophagus. - Afzan Adam; Andrew J. Bulpitt; Darren Treanor (MIUA, 2011)

Context-Based Classification of Cell Nuclei and Tissue Regions in Liver Histopathology. - Phattthanaphong Chomphuwiset; Derek R. Magee; Roger D. Boyle; Darren Treanor (MIUA, 2011)

Context Aware Colour Classification in Digital Microscopy. - Derek R. Magee; Darren Treanor; Phattthanaphong Chomphuwiset; Philip Quirke (MIUA, 2011)

Using a high-resolution wall-sized virtual microscope to teach undergraduate medical students. - Rebecca Randell; Gordon G. A. Hutchins; John Sandars; Thilina Ambepitiya; Darren Treanor; Rhys Thomas; Roy A. Ruddle (CHI Extended Abstracts, 2012)

Visual Parameter Optimization for Biomedical Image Analysis: A Case Study. - A. Johannes Pretorius; Derek R. Magee; Darren Treanor; Roy A. Ruddle (SIGRAD, 2012)

Diagnosis at the microscope: a workplace study of histopathology. - Rebecca Randell; Roy A. Ruddle; Rhys Thomas; Darren Treanor (Cogn. Technol. Work., 2012)

Leveraging wall-sized high-resolution displays for comparative genomics analyses of copy number variation. - Roy A. Ruddle; Waleed Fateen; Darren Treanor; Peter Sondergeld; Phil Quirke (BioVis, 2013)

A framework for quantification of regional cardiac fibrosis from serial sections using 3D whole slide imaging. - Stephen H. Gilbert; Olivier Bernus; Ed White; Nick Roberts; Darren Treanor; Derek R. Magee (EMBC, 2014)

Towards automatic patient selection for chemotherapy in colorectal cancer trials. - Alexander I. Wright; Derek R. Magee; Philip Quirke; Darren E. Treanor (Digital Pathology, 2014)

A Nonlinear Mapping Approach to Stain Normalization in Digital Histopathology Images Using Image-Specific Color Deconvolution. - Adnan Mujahid Khan; Nasir M. Rajpoot; Darren Treanor; Derek R. Magee (IEEE Trans. Biomed. Eng., 2014)

Unsupervised Content Classification Based Nonrigid Registration of Differently Stained Histology Images. - Yi Song 010; Darren Treanor; Andrew J. Bulpitt; Nagitha Wijayathunga; Nick Roberts; Ruth Wilcox; Derek R. Magee (IEEE Trans. Biomed. Eng., 2014)

Liver whole slide image analysis for 3D vessel reconstruction. - Yanhui Liang; Fusheng Wang 001; Darren Treanor; Derek R. Magee; George Teodoro; Yangyang Zhu; Jun Kong 002 (ISBI, 2015)

Barriers and facilitators to the introduction of digital pathology for diagnostic work. - Rebecca Randell; Roy A. Ruddle; Darren Treanor (MedInfo, 2015)

A 3D Primary Vessel Reconstruction Framework with Serial Microscopy Images. - Yanhui Liang; Fusheng Wang 001; Darren Treanor; Derek R. Magee; George Teodoro; Yangyang Zhu; Jun Kong 002 (MICCAI (3), 2015)

A Novel Approach for the Colour Deconvolution of Multiple Histological Stains. - Duane Carey; Nagitha Wijayathunga; Andrew J. Bulpitt; Darren Treanor (MIUA, 2015)

Performance and interaction behaviour during visual search on large, high-resolution displays. - Roy A. Ruddle; Rhys G. Thomas; Rebecca S. Randell; Phil Quirke; Darren Treanor (Inf. Vis., 2015)

Consistency and Standardization of Color in Medical Imaging: a Consensus Report. - Aldo Badano; Craig Revie; Andrew Casertano; Wei-Chung Cheng; Phil J. Green; Tom Kimpe; Elizabeth A. Krupinski; Christye Sisson; Stein Olav Skrøvseth; Darren Treanor; Paul A. Boynton; David A. Clunie; et al. (J. Digit. Imaging, 2015)

Effect of Display Resolution on Time to Diagnosis with Virtual Pathology Slides in a Systematic Search Task. - Rebecca Randell; Thilina Ambepitiya; Claudia Mello-Thoms; Roy A. Ruddle; David S. Brettle; Rhys G. Thomas; Darren Treanor (J. Digit. Imaging, 2015)

Incorporating Local and Global Context for Better Automated Analysis of Colorectal Cancer on Digital Pathology Slides. - Alexander I. Wright; Derek R. Magee; Philip Quirke; Darren Treanor (MIUA, 2016)

Understanding Design for Automated Image Analysis in Digital Pathology. - Jesper Molin; Pawel W. Wozniak; Claes Lundström; Darren Treanor; Morten Fjeld (NordiCHI, 2016)

Scale Stain: Multi-Resolution Feature Enhancement in Pathology Visualization. - Jesper Molin; Anna Bodén; Darren Treanor; Morten Fjeld; Claes Lundström (CoRR, 2016)

A framework for 3D vessel analysis using whole slide images of liver tissue sections. - Yanhui Liang; Fusheng Wang 001; Darren Treanor; Derek R. Magee; Nick Roberts; George Teodoro; Yangyang Zhu; Jun Kong 002 (Int. J. Comput. Biol. Drug Des., 2016)

The Design and Evaluation of Interfaces for Navigating Gigapixel Images in Digital Pathology. - Roy A. Ruddle; Rhys G. Thomas; Rebecca Randell; Philip Quirke; Darren Treanor (ACM Trans. Comput. Hum. Interact., 2016)

Transfer Function design toolbox for full-color volume datasets. - Martin Falk; Ingrid Hotz; Patric Ljung; Darren Treanor; Anders Ynnerman; Claes Lundström (PacificVis, 2017)

Interactive Visualization of 3D Histopathology in Native Resolution. - Martin Falk; Anders Ynnerman; Darren Treanor; Claes Lundström (IEEE Trans. Vis. Comput. Graph., 2019)

Proactive Construction of an Annotated Imaging Database for Artificial Intelligence Training. - Caroline Bivik Stadler; Martin Lindvall; Claes Lundström; Anna Bodén; Karin Lindman; Jeronimo Rose; Darren Treanor; Johan Blomma; Karin Stacke; Nicolas Pinchaud; Martin Hedlund; Filip Landgren; et al. (J. Digit. Imaging, 2021)

The Effect of Quality Control on Accuracy of Digital Pathology Image Analysis. - Alexander I. Wright; Catriona M. Dunn; Michael Hale; Gordon G. A. Hutchins; Darren E. Treanor (IEEE J. Biomed. Health Informatics, 2021)

Weakly-supervised learning for image-based classification of primary melanomas into genomic immune subgroups. - Lucy Godson; Navid Alemi Koohbanani; Jeremie Nsengimana; Graham P. Cook; Emily L. Clarke; Darren Treanor; D. Timothy Bishop; Julia Newton-Bishop; Ali Gooya (MIDL, 2022)

Multi-level Graph Representations of Melanoma Whole Slide Images for Identifying Immune Subgroups. - Lucy Godson; Navid Alemi Koohbanani; Jeremie Nsengimana; Graham P. Cook; Emily L. Clarke; Darren Treanor; D. Timothy Bishop; Julia Newton-Bishop; Derek R. Magee (GRAIL/OCELOT@MICCAI, 2023)

Digital pathology whole slide image compression with vector quantized variational autoencoders. - Jason Keighley; Marc de Kamps; Alexander I. Wright; Darren Treanor (Digital and Computational Pathology, 2023)

Navigating the reporting guideline environment for computational pathology: A review. - Clare McGenity; Darren Treanor (CoRR, 2023)

Artificial intelligence in digital pathology: a diagnostic test accuracy systematic review and meta-analysis. - Clare McGenity; Emily L. Clarke; Charlotte Jennings; Gillian Matthews; Caroline Cartlidge; Henschel Freduah-Agyemang; Deborah D. Stocken; Darren Treanor (CoRR, 2023)

Pathologists light level preferences using the microscope - a study to guide digital pathology display use. - Charlotte Jennings; Darren Treanor; David S. Brettle (CoRR, 2023)

How, for whom, and in what contexts will artificial intelligence be adopted in pathology? A realist interview study. - Henry King; Bethany Williams; Darren Treanor; Rebecca Randell (J. Am. Medical Informatics Assoc., 2023)

Immune subtyping of melanoma whole slide images using multiple instance learning. - Lucy Godson; Navid Alemi Koohbanani; Jeremie Nsengimana; Graham P. Cook; Emily L. Clarke; Darren Treanor; D. Timothy Bishop; Julia Newton-Bishop; Ali Gooya; Derek R. Magee (Medical Image Anal., 2024)

Public evidence on AI products for digital pathology. - Gillian Matthews; Clare McGenity; Daljeet Bansal; Darren Treanor (npj Digit. Medicine, 2024)

Artificial intelligence in digital pathology: a systematic review and meta-analysis of diagnostic test accuracy. - Clare McGenity; Emily L. Clarke; Charlotte Jennings; Gillian Matthews; Caroline Cartlidge; Henschel Freduah-Agyemang; Deborah D. Stocken; Darren Treanor (npj Digit. Medicine, 2024)

Liver-Quant: Feature-based image analysis toolkit for automatic quantification of metabolic dysfunction-associated steatotic liver disease. - Mohsen Farzi; Clare McGenity; Alyn Cratchley; Leo Leplat; Peter Bankhead; Alexander I. Wright; Darren Treanor (Comput. Biol. Medicine, 2025)

Machine learning-based multimodal prognostic models integrating pathology images and high-throughput omic data for overall survival prediction in cancer: a systematic review. - Charlotte Jennings; Andrew Broad; Lucy Godson; Emily L. Clarke; David R. Westhead; Darren Treanor (CoRR, 2025)