Reanalyze unassigned reads in Sanger based metagenomic data using conserved gene adjacency. - Francis C. Weng; Chien-Hao Su; Ming-Tsung Hsu; Tse-Yi Wang; Huai-Kuang Tsai; Daryi Wang (BMC Bioinform., 2010)

MetaABC - an integrated metagenomics platform for data adjustment, binning and clustering. - Chien-Hao Su; Ming-Tsung Hsu; Tse-Yi Wang; Sufeng Chiang; Jen-Hao Cheng; Francis C. Weng; Cheng-Yan Kao; Daryi Wang; Huai-Kuang Tsai (Bioinform., 2011)

The Impact of Normalization and Phylogenetic Information on Estimating the Distance for Metagenomes. - Chien-Hao Su; Tse-Yi Wang; Ming-Tsung Hsu; Francis Cheng-Hsuan Weng; Cheng-Yan Kao; Daryi Wang; Huai-Kuang Tsai (IEEE ACM Trans. Comput. Biol. Bioinform., 2012)

Inferring microbial interaction network from microbiome data using RMN algorithm. - Kun-Nan Tsai; Shu-Hsi Lin; Wei-Chung Liu; Daryi Wang (BMC Syst. Biol., 2015)

MetaMIS: a metagenomic microbial interaction simulator based on microbial community profiles. - Grace Tzun-Wen Shaw; Yueh-Yang Pao; Daryi Wang (BMC Bioinform., 2016)