Clustering incorporating shortest paths identifies relevant modules in functional interaction networks. - Jennifer Hallinan; Matthew R. Pocock; Stephen G. Addinall; David A. Lydall; Anil Wipat (CIBCB, 2009)

Colonyzer: automated quantification of micro-organism growth characteristics on solid agar. - Conor Lawless; Darren J. Wilkinson; Alexander Young; Stephen G. Addinall; David A. Lydall (BMC Bioinform., 2010)

Customizable views on semantically integrated networks for systems biology. - Jochen Weile; Matthew R. Pocock; Simon J. Cockell; Phillip W. Lord; James M. Dewar; Eva-Maria Holstein; Darren J. Wilkinson; David A. Lydall; Jennifer Hallinan; Anil Wipat (Bioinform., 2011)

Fast Bayesian parameter estimation for stochastic logistic growth models. - Jonathan Heydari; Conor Lawless; David A. Lydall; Darren J. Wilkinson (Biosyst., 2014)