The JBEI quantitative metabolic modeling library (jQMM): a python library for modeling microbial metabolism. - Garrett W. Birkel; Amit Ghosh; Vinay Satish Kumar; Daniel Weaver; David Ando; Tyler W. H. Backman; Adam P. Arkin; Jay D. Keasling; Héctor García Martín (BMC Bioinform., 2017)

Erratum to: The JBEI quantitative metabolic modeling library (jQMM): a python library for modeling microbial metabolism. - Garrett W. Birkel; Amit Ghosh; Vinay Satish Kumar; Daniel Weaver; David Ando; Tyler W. H. Backman; Adam P. Arkin; Jay D. Keasling; Héctor García Martín (BMC Bioinform., 2017)

BayFlux: A Bayesian method to quantify metabolic Fluxes and their uncertainty at the genome scale. - Tyler W. H. Backman; Christina Schenk; Tijana Radivojevic; David Ando; Jahnavi Singh; Jeffrey J. Czajka; Zak Costello; Jay D. Keasling; Yinjie Tang; Elena V. Akhmatskaya; Héctor García Martín (PLoS Comput. Biol., 2023)