Messages, Strands and Threads: Measuring Use of Electronic Patient-Provider Messaging. - David Carrell; James D. Ralston (AMIA, 2005)

Variation in Adoption Rates of a Patient Web Portal with a Shared Medical Record by Age, Gender, and Morbidity Level. - David Carrell; James D. Ralston (AMIA, 2006)

Use and Satisfaction of a Patient Web Portal with a Shared Medical Record between Patients and Providers. - James D. Ralston; James Hereford; David Carrell; Maureena Moran (AMIA, 2006)

Research Paper: Patient Web Services Integrated with a Shared Medical Record: Patient Use and Satisfaction. - James D. Ralston; David Carrell; Robert Reid 002; Melissa A. Anderson; Maureena Moran; James Hereford (J. Am. Medical Informatics Assoc., 2007)

An analytical approach to characterize morbidity profile dissimilarity between distinct cohorts using electronic medical records. - Jonathan S. Schildcrout; Melissa A. Basford; Jill M. Pulley; Daniel R. Masys; Dan M. Roden; Deede Wang; Christopher G. Chute; Iftikhar J. Kullo; David Carrell; Peggy L. Peissig; Abel N. Kho; Joshua C. Denny (J. Biomed. Informatics, 2010)

A Strategy for Deploying Secure Cloud-Based Natural Language Processing Systems for Applied Research Involving Clinical Text. - David Carrell (HICSS, 2011)

Using Electronic Health Records to Identify Heart Failure Cohorts with Differentiation for Preserved and Reduced Ejection Fraction. - Suzette J. Bielinski; Jyotishman Pathak; Hongfang Liu; Sunghwan Sohn; Gail P. Jarvik; David Carrell; Naveen Pereira; Véronique L. Roger (AMIA, 2012)

Using PheWAS to Assess Pleiotropy of Genetic Risk Scores for Rheumatoid Arthritis and Coronary Artery Disease in the eMERGE Network. - Robert J. Carroll; Katherine P. Liao; Anne E. Eyler; Lisa Bastarache; Dana C. Crawford; Peggy L. Peissig; Jyotishman Pathak; David Carrell; Abel N. Kho; Rongling Li; Daniel R. Masys; Gail P. Jarvik; et al. (AMIA, 2012)

Importance of multi-modal approaches to effectively identify cataract cases from electronic health records. - Peggy L. Peissig; Luke V. Rasmussen; Richard L. Berg; James G. Linneman; Catherine A. McCarty; Carol Waudby; Lin Chen; Joshua C. Denny; Russell A. Wilke; Jyotishman Pathak; David Carrell; Abel N. Kho; et al. (J. Am. Medical Informatics Assoc., 2012)

Predictive Models in Mental Health: From Diagnosis to Treatment. - Sandy Huang; Paea LePendu; Srinivasan V Iyer 002; Ming Tai-Seale; David Carrell; Nigam Shah (AMIA, 2013)

Negation's Not Solved: Reconsidering Negation Annotation and Evaluation. - Stephen T. Wu; Timothy A. Miller; James J. Masanz; Matthew Coarr; David Carrell; Scott R. Halgrim; David Harris 004; Cheryl Clark (AMIA, 2013)

Hiding in plain sight: use of realistic surrogates to reduce exposure of protected health information in clinical text. - David Carrell; Bradley A. Malin; John S. Aberdeen; Samuel Bayer; Cheryl Clark; Ben Wellner; Lynette Hirschman (J. Am. Medical Informatics Assoc., 2013)

Linking Adenomas Between Colonoscopy And Pathology Notes For PROSPR. - Scott R. Halgrim; Leslie Sizemore; Edward Pham; Gabrielle Gundersen; David Carrell; Karen Wernli; Jessica Chubak; Carolyn M. Rutter (AMIA, 2014)

De-identification of clinical narratives through writing complexity measures. - Muqun Li; David Carrell; John S. Aberdeen; Lynette Hirschman; Bradley A. Malin (Int. J. Medical Informatics, 2014)

Toward personalizing treatment for depression: predicting diagnosis and severity. - Sandy Huang; Paea LePendu; Srinivasan V Iyer 002; Ming Tai-Seale; David Carrell; Nigam H. Shah (J. Am. Medical Informatics Assoc., 2014)

Design patterns for the development of electronic health record-driven phenotype extraction algorithms. - Luke V. Rasmussen; William K. Thompson; Jennifer A. Pacheco; Abel N. Kho; David Carrell; Jyotishman Pathak; Peggy L. Peissig; Gerard Tromp; Joshua C. Denny; Justin B. Starren (J. Biomed. Informatics, 2014)

Identifying gene-gene interactions that are highly associated with Body Mass Index using Quantitative Multifactor Dimensionality Reduction (QMDR). - Rishika De; Shefali S. Verma; Fotios Drenos; Emily Rose Holzinger; Michael Holmes; Molly A. Hall; David R. Crosslin; David Carrell; Hakon Hakonarson; Gail P. Jarvik; Eric B. Larson; Jennifer A. Pacheco; et al. (BioData Min., 2015)

Using natural language processing to identify problem usage of prescription opioids. - David S. Carrell; David J. Cronkite; Roy E. Palmer; Kathleen Saunders; David E. Gross; Elizabeth T. Masters; Timothy R. Hylan; Michael Von Korff (Int. J. Medical Informatics, 2015)

Desiderata for computable representations of electronic health records-driven phenotype algorithms. - Huan Mo; William K. Thompson; Luke V. Rasmussen; Jennifer A. Pacheco; Guoqian Jiang; Richard C. Kiefer; Qian Zhu 003; Jie Xu 011; Enid N. H. Montague; David S. Carrell; Todd Lingren; Frank D. Mentch; et al. (J. Am. Medical Informatics Assoc., 2015)

Using natural language processing to extract mammographic findings. - Hongyuan Gao; Erin J. Aiello Bowles; David Carrell; Diana S. M. Buist (J. Biomed. Informatics, 2015)

PheKB: a catalog and workflow for creating electronic phenotype algorithms for transportability. - Jacqueline Kirby; Peter Speltz; Luke V. Rasmussen; Melissa A. Basford; Omri Gottesman; Peggy L. Peissig; Jennifer A. Pacheco; Gerard Tromp; Jyotishman Pathak; David S. Carrell; Stephen B. Ellis; Todd Lingren; et al. (J. Am. Medical Informatics Assoc., 2016)

Optimizing annotation resources for natural language de-identification via a game theoretic framework. - Muqun Li; David Carrell; John S. Aberdeen; Lynette Hirschman; Jacqueline Kirby; Bo Li 026; Yevgeniy Vorobeychik; Bradley A. Malin (J. Biomed. Informatics, 2016)

Is an Algorithm Just an Algorithm? How to Define Clinical Concepts for Use in Comparative Safety and Effectiveness Distributed Research Networks. - Jeffrey S. Brown; Robert Ball; David S. Carrell; Leonard W. D'Avolio; Keith Marsolo (CRI, 2017)

Discovery and replication of SNP-SNP interactions for quantitative lipid traits in over 60,000 individuals. - Emily Rose Holzinger; Shefali S. Verma; Carrie Colleen Buchanan Moore; Molly A. Hall; Rishika De; Diane Gilbert-Diamond; Matthew B. Lanktree; Nathan Pankratz; Antoinette Amuzu; Amber Burt; Caroline Dale; Scott M. Dudek; et al. (BioData Min., 2017)

Challenges in adapting existing clinical natural language processing systems to multiple, diverse health care settings. - David S. Carrell; Robert E. Schoen; Daniel A. Leffler; Michele Morris; Sherri Rose; Andrew Baer; Seth D. Crockett; Rebecca Gourevitch; Katie M. Dean; Ateev Mehrotra (J. Am. Medical Informatics Assoc., 2017)

Detecting the Presence of an Individual in Phenotypic Summary Data. - Yongtai Liu; Zhiyu Wan; Weiyi Xia; Murat Kantarcioglu; Yevgeniy Vorobeychik; Ellen Wright Clayton; Abel N. Kho; David S. Carrell; Bradley A. Malin (AMIA, 2018)

Automatic Text De-Identification: How and When is it Acceptable? - Stéphane M. Meystre; David S. Carrell; Lynette Hirschman; John S. Aberdeen; Paul Fearn; Valentina Petkov; Jonathan C. Silverstein (AMIA, 2018)

Using Natural Language Processing of Free-Text Radiology Reports to Identify Type 1 Modic Endplate Changes. - Hannu T. Huhdanpaa; W. Katherine Tan; Sean D. Rundell; Pradeep Suri; Falgun H. Chokshi; Bryan A. Comstock; Patrick J. Heagerty; Kathryn T. James; Andrew L. Avins; Srdjan S. Nedeljkovic; David R. Nerenz; David F. Kallmes; et al. (J. Digit. Imaging, 2018)

Facilitating Self-reflection about Values and Self-care Among Individuals with Chronic Conditions. - Catherine Y. Lim; Andrew B. L. Berry; Andrea L. Hartzler; Tad Hirsch; David S. Carrell; Zoë A. Bermet; James D. Ralston (CHI, 2019)

The machine giveth and the machine taketh away: a parrot attack on clinical text deidentified with hiding in plain sight. - David S. Carrell; David J. Cronkite; Muqun (Rachel) Li; Steve Nyemba; Bradley A. Malin; John S. Aberdeen; Lynette Hirschman (J. Am. Medical Informatics Assoc., 2019)

Enrichment sampling for a multi-site patient survey using electronic health records and census data. - Nathaniel D. Mercaldo; Kyle B. Brothers; David S. Carrell; Ellen Wright Clayton; John J. Connolly; Ingrid A. Holm; Carol R. Horowitz; Gail P. Jarvik; Terrie E. Kitchner; Rongling Li; Catherine A. McCarty; Jennifer B. McCormick; et al. (J. Am. Medical Informatics Assoc., 2019)

Facilitating phenotype transfer using a common data model. - George Hripcsak; Ning Shang; Peggy L. Peissig; Luke V. Rasmussen; Cong Liu 020; Barbara Benoit; Robert J. Carroll; David S. Carrell; Joshua C. Denny; Ozan Dikilitas; Vivian S. Gainer; Kayla Marie Howell; et al. (J. Biomed. Informatics, 2019)

Making work visible for electronic phenotype implementation: Lessons learned from the eMERGE network. - Ning Shang; Cong Liu 020; Luke V. Rasmussen; Casey N. Ta; Robert J. Carroll; Barbara Benoit; Todd Lingren; Ozan Dikilitas; Frank D. Mentch; David S. Carrell; Wei-Qi Wei; Yuan Luo 001; et al. (J. Biomed. Informatics, 2019)

Resilience of clinical text de-identified with "hiding in plain sight" to hostile reidentification attacks by human readers. - David S. Carrell; Bradley A. Malin; David J. Cronkite; John S. Aberdeen; Cheryl Clark; Muqun (Rachel) Li; Dikshya Bastakoty; Steve Nyemba; Lynette Hirschman (J. Am. Medical Informatics Assoc., 2020)

Evaluation of the Portability of Natural Language Processing-based Computable Phenotypes in the eMERGE Network. - Jennifer A. Pacheco; Luke V. Rasmussen; Ken Wiley; Thomas N. Person; David J. Cronkite; Sunghwan Sohn; Shawn N. Murphy; Justin H. Gundelach; Vivian S. Gainer; Victor M. Castro; Cong Liu 020; Todd Lingren; et al. (AMIA, 2021)

Medical records-based chronic kidney disease phenotype for clinical care and "big data" observational and genetic studies. - Ning Shang; Atlas Khan; Fernanda Polubriaginof; Francesca Zanoni; Karla Mehl; David Fasel; Paul E. Drawz; Robert J. Carroll; Joshua C. Denny; Matthew A. Hathcock; Adelaide M. Arruda-Olson; Peggy L. Peissig; et al. (npj Digit. Medicine, 2021)

Data-driven automated classification algorithms for acute health conditions: Applying PheNorm to COVID-19 disease. - Joshua C. Smith; Daniel Park; Jill Whitaker Bey; Michael F. McLemore; Elizabeth Hanchrow; Dax Westerman; Joshua Osmanski; Robert Winter 003; Arvind Ramaprasan; Ann Kelley; Mary Shea; David J. Cronkite; et al. (AMIA, 2022)

Development of a machine learning model to predict mild cognitive impairment using natural language processing in the absence of screening. - Robert B. Penfold; David S. Carrell; David J. Cronkite; Chester Pabiniak; Tammy Dodd; Ashley M. H. Glass; Eric Johnson; Ella Thompson; H. Michael Arrighi; Paul E. Stang (BMC Medical Informatics Decis. Mak., 2022)

Under-specification as the source of ambiguity and vagueness in narrative phenotype algorithm definitions. - Jingzhi Yu; Jennifer A. Pacheco; Anika S. Ghosh; Yuan Luo 001; Chunhua Weng; Ning Shang; Barbara Benoit; David S. Carrell; Robert J. Carroll; Ozan Dikilitas; Robert R. Freimuth; Vivian S. Gainer; et al. (BMC Medical Informatics Decis. Mak., 2022)

Characterizing variability of electronic health record-driven phenotype definitions. - Pascal S. Brandt; Abel N. Kho; Yuan Luo 001; Jennifer A. Pacheco; Theresa L. Walunas; Hakon Hakonarson; George Hripcsak; Cong Liu 020; Ning Shang; Chunhua Weng; Nephi Walton; David S. Carrell; et al. (J. Am. Medical Informatics Assoc., 2023)

A general framework for developing computable clinical phenotype algorithms. - David S. Carrell; James S. Floyd; Susan Gruber; Brian L. Hazlehurst; Patrick J. Heagerty; Jennifer C. Nelson; Brian D. Williamson; Robert Ball (J. Am. Medical Informatics Assoc., 2024)

Data-driven automated classification algorithms for acute health conditions: applying PheNorm to COVID-19 disease. - Joshua C. Smith; Brian D. Williamson; David J. Cronkite; Daniel Park; Jill M. Whitaker; Michael F. McLemore; Joshua Osmanski; Robert Winter 003; Arvind Ramaprasan; Ann Kelley; Mary Shea; Saranrat Wittayanukorn; et al. (J. Am. Medical Informatics Assoc., 2024)