UK CropNet: a collection of databases and bioinformatics resources for crop plant genomics. - Jo L. Dicks; Mary Anderson; Linda Cardle; Sam Cartinhour; Matthew Couchman; Guy Davenport; Jeremy Dickson; Mike Gale; David F. Marshall; Sean T. May; Hamish McWilliam; Andrew O'Malia; et al. (Nucleic Acids Res., 2000)

Plant snoRNA database. - John W. S. Brown; Manuel Echeverria; Liang-Hu Qu; Todd M. Lowe; Jean-Pierre Bachellerie; Alexander Hüttenhofer; James P. Kastenmayer; Pamela J. Green; Paul D. Shaw; David F. Marshall (Nucleic Acids Res., 2003)

TOPALi: software for automatic identification of recombinant sequences within DNA multiple alignments. - Iain Milne; Frank Wright; Glenn Rowe; David F. Marshall; Dirk Husmeier; Gráinne McGuire (Bioinform., 2004)

Arabidopsis nucleolar protein database (AtNoPDB). - John W. S. Brown; Peter J. Shaw; Paul D. Shaw; David F. Marshall (Nucleic Acids Res., 2005)

TOPALi v2: a rich graphical interface for evolutionary analyses of multiple alignments on HPC clusters and multi-core desktops. - Iain Milne; Dominik Lindner; Micha Bayer; Dirk Husmeier; Gráinne McGuire; David F. Marshall; Frank Wright (Bioinform., 2009)

Tablet - next generation sequence assembly visualization. - Iain Milne; Micha Bayer; Linda Cardle; Paul D. Shaw; Gordon Stephen; Frank Wright; David F. Marshall (Bioinform., 2010)

Flapjack - graphical genotype visualization. - Iain Milne; Paul D. Shaw; Gordon Stephen; Micha Bayer; Linda Cardle; William T. B. Thomas; Andrew J. Flavell; David F. Marshall (Bioinform., 2010)

Comparative visualization of genetic and physical maps with Strudel. - Micha Bayer; Iain Milne; Gordon Stephen; Paul D. Shaw; Linda Cardle; Frank Wright; David F. Marshall (Bioinform., 2011)

Using Tablet for visual exploration of second-generation sequencing data. - Iain Milne; Gordon Stephen; Micha Bayer; Peter J. A. Cock; Leighton Pritchard; Linda Cardle; Paul D. Shaw; David F. Marshall (Briefings Bioinform., 2013)

Helium: visualization of large scale plant pedigrees. - Paul D. Shaw; Martin Graham 001; Jessie B. Kennedy; Iain Milne; David F. Marshall (BMC Bioinform., 2014)

Interactive Visualisation for Surface Proximity Monitoring. - David F. Marshall; Henry J. Gardner; Bruce H. Thomas (AUIC, 2015)

An investigation of causes of false positive single nucleotide polymorphisms using simulated reads from a small eukaryote genome. - António Ribeiro; Agnieszka Golicz; Christine Hackett; Iain Milne; Gordon Stephen; David F. Marshall; Andrew J. Flavell; Micha Bayer (BMC Bioinform., 2015)

BrAPI - an application programming interface for plant breeding applications. - Peter Selby; Rafael Abbeloos; Jan Erik Backlund; Martin Basterrechea Salido; Guillaume Bauchet; Omar E. Benites-Alfaro; Clayton L. Birkett; Viana C. Calaminos; Pierre Carceller; Guillaume Cornut; Bruno Vasques Costa; Jeremy D. Edwards; et al. (Bioinform., 2019)