Automating Genomic Data Mining via a Sequence-based Matrix Format and Associative Rule Set. - Jonathan D. Wren; David K. Johnson 001; Le Gruenwald (BMC Bioinform., 2005)

Bioinformatics process management: information flow via a computational journal. - Lance Feagan; Justin P. Rohrer; Alexander Garrett; Heather Amthauer; Ed Komp; David K. Johnson 001; Adam Hock; Terry Clark; Gerald H. Lushington; Gary J. Minden; Victor Frost (Source Code Biol. Medicine, 2007)

Druggable Protein Interaction Sites Are More Predisposed to Surface Pocket Formation than the Rest of the Protein Surface. - David K. Johnson 001; John Karanicolas (PLoS Comput. Biol., 2013)

Selectivity by Small-Molecule Inhibitors of Protein Interactions Can Be Driven by Protein Surface Fluctuations. - David K. Johnson 001; John Karanicolas (PLoS Comput. Biol., 2015)

Ultra-High-Throughput Structure-Based Virtual Screening for Small-Molecule Inhibitors of Protein-Protein Interactions. - David K. Johnson 001; John Karanicolas (J. Chem. Inf. Model., 2016)