Gene Selection and Clustering for Time-course and Dose-response Microarray Experiments Using Order-restricted Inference. - Shyamal D. Peddada; Edward K. Lobenhofer; Leping Li; Cynthia A. Afshari; Clarice R. Weinberg; David M. Umbach (Bioinform., 2003)

Application of the GA/KNN method to SELDI proteomics data. - Leping Li; David M. Umbach; Paul Terry; Jack A. Taylor (Bioinform., 2004)

Accurate anchoring alignment of divergent sequences. - Weichun Huang; David M. Umbach; Leping Li (Bioinform., 2006)

Optimized mixed Markov models for motif identification. - Weichun Huang; David M. Umbach; Uwe Ohler; Leping Li (BMC Bioinform., 2006)

A response to information criterion-based clustering with order-restricted candidate profiles in short time-course microarray experiments. - Shyamal D. Peddada; David M. Umbach; Shawn F. Harris (BMC Bioinform., 2009)

coMOTIF: a mixture framework for identifying transcription factor and a coregulator motif in ChIP-seq Data. - Mengyuan Xu; Clarice R. Weinberg; David M. Umbach; Leping Li (Bioinform., 2011)

Simulating autosomal genotypes with realistic linkage disequilibrium and a spiked-in genetic effect. - Min Shi 002; David M. Umbach; Alison S. Wise; Clarice R. Weinberg (BMC Bioinform., 2018)

CDSeq: A novel complete deconvolution method for dissecting heterogeneous samples using gene expression data. - Kai Kang; Qian Meng; Igor Shats; David M. Umbach; Melissa Li; Yuanyuan Li; Xiaoling Li; Leping Li (PLoS Comput. Biol., 2019)

CDSeqR: fast complete deconvolution for gene expression data from bulk tissues. - Kai Kang; Caizhi Huang; Yuanyuan Li; David M. Umbach; Leping Li (BMC Bioinform., 2021)

Erratum to: GADGETS: a genetic algorithm for detecting epistasis using nuclear families. - Michael Nodzenski; Min Shi 002; Juno M. Krahn; Alison S. Wise; Yuanyuan Li; Leping Li; David M. Umbach; Clarice R. Weinberg (Bioinform., 2022)

GADGETS: a genetic algorithm for detecting epistasis using nuclear families. - Michael Nodzenski; Min Shi 002; Juno M. Krahn; Alison S. Wise; Yuanyuan Li; Leping Li; David M. Umbach; Clarice R. Weinberg (Bioinform., 2022)

OSApredictor: A tool for prediction of moderate to severe obstructive sleep apnea-hypopnea using readily available patient characteristics. - Amlan Talukder; Yuanyuan Li; Deryck Yeung; Min Shi 002; David M. Umbach; Zheng Fan; Leping Li (Comput. Biol. Medicine, 2024)

Differences in brain spindle density during sleep between patients with and without type 2 diabetes. - Deryck Yeung; Amlan Talukder; Min Shi 002; David M. Umbach; Yuanyuan Li; Alison A. Motsinger-Reif; Janice J. Hwang; Zheng Fan; Leping Li (Comput. Biol. Medicine, 2025)