MODifieR: an Ensemble R Package for Inference of Disease Modules from Transcriptomics Networks. - Hendrik A. de Weerd; Tejaswi V. S. Badam; David Martínez-Enguita; Julia Åkesson; Daniel Muthas; Mika Gustafsson; Zelmina Lubovac-Pilav (Bioinform., 2020)

NCAE: data-driven representations using a deep network-coherent DNA methylation autoencoder identify robust disease and risk factor signatures. - David Martínez-Enguita; Sanjiv K. Dwivedi; Rebecka Jörnsten; Mika Gustafsson (Briefings Bioinform., 2023)