Thermodynamic modeling of transcription: sensitivity analysis differentiates biological mechanism from mathematical model-induced effects. - Jacqueline M. Dresch; Xiaozhou Liu; David N. Arnosti; Ahmet Ay (BMC Syst. Biol., 2010)

Two-Layer Mathematical Modeling of Gene Expression: Incorporating DNA-Level Information and System Dynamics. - Jacqueline M. Dresch; Marc A. Thompson; David N. Arnosti; Chichia Chiu (SIAM J. Appl. Math., 2013)