Noise-Stabilized Long-Distance Synchronization in Populations of Model Neurons. - David R. McMillen; Nancy Kopell (J. Comput. Neurosci., 2003)

Biochemical Network Stochastic Simulator (BioNetS): software for stochastic modeling of biochemical networks. - David Adalsteinsson; David R. McMillen; Timothy C. Elston (BMC Bioinform., 2004)

Increasing the efficiency of bacterial transcription simulations: When to exclude the genome without loss of accuracy. - Marco A. J. Iafolla; Guang Qiang Dong; David R. McMillen (BMC Bioinform., 2008)

A synthetic genetic circuit whose signal-response curve is temperature-tunable from band-detection to sigmoidal behaviour. - Sangram Bagh; David R. McMillen (Nat. Comput., 2010)