Ergatis: a web interface and scalable software system for bioinformatics workflows. - Joshua Orvis; Jonathan Crabtree; Kevin Galens; Aaron Gussman; Jason M. Inman; Eduardo Lee; Sreenath Nampally; David R. Riley 002; Jaideep P. Sundaram; Victor Felix; Brett Whitty; Anup Mahurkar; et al. (Bioinform., 2010)

CloVR: A virtual machine for automated and portable sequence analysis from the desktop using cloud computing. - Samuel V. Angiuoli; Malcolm Matalka; Aaron Gussman; Kevin Galens; Mahesh Vangala; David R. Riley 002; Cesar Arze; James Robert White; Owen White; W. Florian Fricke (BMC Bioinform., 2011)

Using Sybil for interactive comparative genomics of microbes on the web. - David R. Riley 002; Samuel V. Angiuoli; Jonathan Crabtree; Julie C. Dunning Hotopp; Hervé Tettelin (Bioinform., 2012)

Bacteria-Human Somatic Cell Lateral Gene Transfer Is Enriched in Cancer Samples. - David R. Riley 002; Karsten B. Sieber; Kelly M. Robinson; James Robert White; Ashwinkumar Ganesan; Syrus Nourbakhsh; Julie C. Dunning Hotopp (PLoS Comput. Biol., 2013)