Update of NUREBASE: nuclear hormone receptor functional genomics. - David Ruau; Jorge Duarte; Tarik Ourjdal; Guy Perrière; Vincent Laudet; Marc Robinson-Rechavi (Nucleic Acids Res., 2004)

Public microarray repository semantic annotation with ontologies employing text mining and expression profile correlation. - David Ruau; Corinna Kolárik; Heinz-Theodor Mevissen; Emmanuel Müller; Ira Assent; Ralph Krieger; Thomas Seidl 001; Martin Hofmann-Apitius; Martin Zenke (BMC Bioinform., 2008)

Comparison of automated and human assignment of MeSH terms on publicly-available molecular datasets. - David Ruau; Michael Mbagwu; Joel T. Dudley; Vijay Krishnan; Atul J. Butte (J. Biomed. Informatics, 2011)

Integrative Approach to Pain Genetics Identifies Pain Sensitivity Loci across Diseases. - David Ruau; Joel Dudley; Rong Chen 006; Nicholas G. Phillips; Gary E. Swan; Laura Lazzeroni; J. David Clark; Atul J. Butte; Martin S. Angst (PLoS Comput. Biol., 2012)

Systematic Identification of Risk Factors for Alzheimer's Disease Through Shared Genetic Architecture and Electronic Medical Records. - Li Li 062; David Ruau; Rong Chen 006; Susan C. Weber; Atul J. Butte (Pacific Symposium on Biocomputing, 2013)

TRES predicts transcription control in embryonic stem cells. - Christopher Pooley; David Ruau; Patrick Lombard; Berthold Göttgens; Anagha Joshi (Bioinform., 2014)

Data Science Solution to Event Prediction in Outsourced Clinical Trial Models. - Daniel Dalevi; Susan Lovick; Helen Mann; Paul D. Metcalfe; Stuart Spencer; Sally Hollis; David Ruau (MedInfo, 2015)

CODEX: a next-generation sequencing experiment database for the haematopoietic and embryonic stem cell communities. - Manuel Sánchez-Castillo; David Ruau; Adam C. Wilkinson; Felicia S. L. Ng; Rebecca Hannah; Evangelia Diamanti; Patrick Lombard; Nicola K. Wilson; Berthold Göttgens (Nucleic Acids Res., 2015)

A graphical model approach visualizes regulatory relationships between genome-wide transcription factor binding profiles. - Felicia S. L. Ng; David Ruau; Lorenz Wernisch; Berthold Göttgens (Briefings Bioinform., 2018)

Discovering key topics from short, real-world medical inquiries via natural language processing and unsupervised learning. - Angelo Ziletti; Christoph Berns; Oliver Treichel; Thomas Weber; Jennifer Liang; Stephanie Kammerath; Marion Schwaerzler; Jagatheswari Virayah; David Ruau; Xin Ma; Andreas Mattern (CoRR, 2020)

Discovering Key Topics From Short, Real-World Medical Inquiries via Natural Language Processing. - Angelo Ziletti; Christoph Berns; Oliver Treichel; Thomas Weber; Jennifer Liang; Stephanie Kammerath; Marion Schwaerzler; Jagatheswari Virayah; David Ruau; Xin Ma; Andreas Mattern (Frontiers Comput. Sci., 2021)