SBEAMS-Microarray: database software supporting genomic expression analyses for systems biology. - Bruz Marzolf; Eric W. Deutsch; Patrick Moss; David S. Campbell; Michael H. Johnson; Timothy Galitski (BMC Bioinform., 2006)

Corra: Computational framework and tools for LC-MS discovery and targeted mass spectrometry-based proteomics. - Mi-Youn K. Brusniak; Bernd Bodenmiller; David S. Campbell; Kelly Cooke; James Eddes; Andrew Garbutt; Hollis Lau; Simon Letarte; Lukas N. Mueller; Vagisha Sharma; Olga Vitek; Ning Zhang; et al. (BMC Bioinform., 2008)

ATAQS: A computational software tool for high throughput transition optimization and validation for selected reaction monitoring mass spectrometry. - Mi-Youn K. Brusniak; Sung-Tat Kwok; Mark Christiansen; David S. Campbell; Lukas Reiter; Paola Picotti; Ulrike Kusebauch; Hector Ramos; Eric W. Deutsch; Jingchun Chen; Robert L. Moritz; Ruedi Aebersold (BMC Bioinform., 2011)

The ProteomeXchange consortium in 2017: supporting the cultural change in proteomics public data deposition. - Eric W. Deutsch; Attila Csordas; Zhi Sun; Andrew F. Jarnuczak; Yasset Pérez-Riverol; Tobias Ternent; David S. Campbell; Manuel Bernal Llinares; Shujiro Okuda; Shin Kawano; Robert L. Moritz; Jeremy Carver; et al. (Nucleic Acids Res., 2017)

The SysteMHC Atlas project. - Wenguang Shao; Patrick G. A. Pedrioli; Witold Wolski; Christian Scurtescu; Emanuel Schmid; Juan Antonio Vizcaíno; Mathieu Courcelles; Heiko Schuster; Daniel Kowalewski; Fabio Marino; Cecilia S. Lindestam Arlehamn; Kerrie Vaughan; et al. (Nucleic Acids Res., 2018)