ChIPpeakAnno: a Bioconductor package to annotate ChIP-seq and ChIP-chip data. - Lihua Julie Zhu; Claude Gazin; Nathan D. Lawson; Hervé Pagès; Simon M. Lin; David S. Lapointe; Michael R. Green (BMC Bioinform., 2010)

FlyFactorSurvey: a database of Drosophila transcription factor binding specificities determined using the bacterial one-hybrid system. - Lihua Julie Zhu; Ryan G. Christensen; Majid Kazemian; Christopher J. Hull; Metewo Selase Enuameh; Matthew D. Basciotta; Jessie A. Brasefield; Cong Zhu; Yuna Asriyan; David S. Lapointe; Saurabh Sinha; Scot A. Wolfe; et al. (Nucleic Acids Res., 2011)