A simple approach for the distribution of computationally intense tasks in an heterogeneous environment: distribution of the MDPP image-processing package. - P. R. Smith; Alexander Ropelewski; Douglas A. Balog; S. Gottesman; David W. Deerfield II (Comput. Appl. Biosci., 1991)

Adventures in Improving the Scaling and Accuracy of a Parallel Molecular Dynamics Program. - Michael F. Crowley; Thomas A. Darden; Thomas E. Cheatham III; David W. Deerfield II (J. Supercomput., 1997)

Implementation of Genetic Sequence Alignment Programs on Supercomputers. - Alexander Ropelewski; Hugh B. Nicholas; David W. Deerfield II (J. Supercomput., 1997)

PM3-compatible zinc parameters optimized for metalloenzyme active sites. - Edward N. Brothers; Dimas Suárez; David W. Deerfield II; Kenneth M. Merz Jr. (J. Comput. Chem., 2004)