MEG Source Imaging Using Multipolar Expansions. - John C. Mosher; Richard M. Leahy; David W. Shattuck; Sylvain Baillet (IPMI, 1999)

Topological refinement of volumetric data. - David W. Shattuck; Richard M. Leahy (Image Processing, 1999)

Topologically constrained cortical surfaces from MRI. - David W. Shattuck; Richard M. Leahy (Image Processing, 2000)

Automated Graph Based Analysis and Correction of Cortical Volume Topology. - David W. Shattuck; Richard M. Leahy (IEEE Trans. Medical Imaging, 2001)

Segmentation of the skull in 3D human MR images using mathematical morphology. - Belma Dogdas; David W. Shattuck; Richard M. Leahy (Image Processing, 2002)

BrainSuite: An automated cortical surface identification tool. - David W. Shattuck; Richard M. Leahy (Medical Image Anal., 2002)

The informatics of a C57BL/6J mouse brain atlas. - Allan MacKenzie-Graham; Eagle S. Jones; David W. Shattuck; Ivo D. Dinov; Mihail Bota; Arthur W. Toga (Neuroinformatics, 2003)

Cortical Surface Parameterization by P-Harmonic Energy Minimization. - Anand A. Joshi; Richard M. Leahy; Paul M. Thompson; David W. Shattuck (ISBI, 2004)

DUFF: Software Tools for Visualization and Processing of Neuroimaging Data. - David W. Shattuck; Allan MacKenzie-Graham; Arthur W. Toga (ISBI, 2004)

A meta-algorithm for brain extraction in MRI. - David E. Rex; David W. Shattuck; Roger P. Woods; Katherine L. Narr; Eileen Luders; Kelly Rehm; Sarah E. Stoltzner; David A. Rottenberg; Arthur W. Toga (NeuroImage, 2004)

A Framework for Registration, Statistical Characterization and Classification of Cortically Constrained Functional Imaging Data. - Anand A. Joshi; David W. Shattuck; Paul M. Thompson; Richard M. Leahy (IPMI, 2005)

LONI Visualization Environment. - Ivo D. Dinov; Daniel J. Valentino; Bae Cheol Shin; Fotios Konstantinidis; Guogang Hu; Allan MacKenzie-Graham; Erh-Fang Lee; David W. Shattuck; Jeff Ma; Craig Schwartz; Arthur W. Toga (J. Digit. Imaging, 2006)

Cerebellar cortical atrophy in experimental autoimmune encephalomyelitis. - Allan MacKenzie-Graham; Matthew R. Tinsley; Kaanan P. Shah; Cynthia Aguilar; Lauren V. Strickland; Jyl Boline; Melanie Martin; Laurie Morales; David W. Shattuck; Russell E. Jacobs; Rhonda R. Voskuhl; Arthur W. Toga (NeuroImage, 2006)

Simultaneous surface and volumetric registration using harmonic maps. - Anand A. Joshi; David W. Shattuck; Paul M. Thompson; Richard M. Leahy (Computational Imaging, 2007)

Brain Image Registration Using Cortically Constrained Harmonic Mappings. - Anand A. Joshi; David W. Shattuck; Paul M. Thompson; Richard M. Leahy (IPMI, 2007)

A Finite Element Method for Elastic Parameterization and Alignment of Cortical Surfaces Using Sulcal Constraints. - Anand A. Joshi; David W. Shattuck; Paul M. Thompson; Richard M. Leahy (ISBI, 2007)

Surface-Constrained Volumetric Brain Registration Using Harmonic Mappings. - Anand A. Joshi; David W. Shattuck; Paul M. Thompson; Richard M. Leahy (IEEE Trans. Medical Imaging, 2007)

Genetic Algorithms for Finite Mixture Model Based Voxel Classification in Neuroimaging. - Jussi Tohka; Evgeny Krestyannikov; Ivo D. Dinov; Allan MacKenzie-Graham; David W. Shattuck; Ulla Ruotsalainen; Arthur W. Toga (IEEE Trans. Medical Imaging, 2007)

Validating unbiased registration on longitudinal MRI scans from the Alzheimer'S Disease neuroimaging initiative (ADNI). - Igor Yanovsky; Paul M. Thompson; Stanley J. Osher; Xue Hua; David W. Shattuck; Arthur W. Toga; Alex D. Leow (ISBI, 2008)

Visualization Tools for High Angular Resolution Diffusion Imaging. - David W. Shattuck; Ming-Chang Chiang; Marina Barysheva; Katie McMahon; Greig I. de Zubicaray; Matthew Meredith; Margaret J. Wright; Arthur W. Toga; Paul M. Thompson (MICCAI (2), 2008)

Erratum to "A meta-algorithm for brain extraction in MRI" [NeuroImage 23 (2004) 625-637]. - David E. Rex; David W. Shattuck; Roger P. Woods; Katherine L. Narr; Eileen Luders; Kelly Rehm; Sarah E. Stoltzner; David A. Rottenberg; Arthur W. Toga (NeuroImage, 2008)

Construction of a 3D probabilistic atlas of human cortical structures. - David W. Shattuck; Mubeena Mirza; Vitria Adisetiyo; Cornelius Hojatkashani; Georges Salamon; Katherine L. Narr; Russell A. Poldrack; Robert M. Bilder; Arthur W. Toga (NeuroImage, 2008)

Optimization of landmark selection for cortical surface registration. - Anand A. Joshi; David W. Shattuck; Dimitrios Pantazis; Quanzheng Li; Hanna Damasio; Richard M. Leahy (CVPR, 2009)

A Framework for Brain Registration via Simultaneous Surface and Volume Flow. - Anand A. Joshi; Richard M. Leahy; Arthur W. Toga; David W. Shattuck (IPMI, 2009)

Segmenting Crossing Fiber Geometries Using Fluid Mechanics Tensor Distribution Function Tractography. - Nathan S. Hageman; Alex D. Leow; David W. Shattuck; Liang Zhan; Paul M. Thompson; Siwei Zhu; Arthur W. Toga (ISBI, 2009)

Posture Matching and Elastic Registration of a Mouse Atlas to Surface Topography Range Data. - Anand A. Joshi; Abhijit J. Chaudhari; Changqing Li; David W. Shattuck; Joyita Dutta; Richard M. Leahy; Arthur W. Toga (ISBI, 2009)

Online resource for validation of brain segmentation methods. - David W. Shattuck; Gautam Prasad; Mubeena Mirza; Katherine L. Narr; Arthur W. Toga (NeuroImage, 2009)

A Parameterization-Based Numerical Method for Isotropic and Anisotropic Diffusion Smoothing on Non-Flat Surfaces. - Anand A. Joshi; David W. Shattuck; Paul M. Thompson; Richard M. Leahy (IEEE Trans. Image Process., 2009)

A Diffusion Tensor Imaging Tractography Algorithm Based on Navier-Stokes Fluid Mechanics. - Nathan S. Hageman; Arthur W. Toga; Katherine L. Narr; David W. Shattuck (IEEE Trans. Medical Imaging, 2009)

Anatomical structural network analysis of human brain using partial correlations of gray matter volumes. - Anand A. Joshi; Shantanu H. Joshi; Ivo D. Dinov; David W. Shattuck; Richard M. Leahy; Arthur W. Toga (ISBI, 2010)

Sulcal set optimization for cortical surface registration. - Anand A. Joshi; Dimitrios Pantazis; Quanzheng Li; Hanna Damasio; David W. Shattuck; Arthur W. Toga; Richard M. Leahy (NeuroImage, 2010)

Comparison of landmark-based and automatic methods for cortical surface registration. - Dimitrios Pantazis; Anand A. Joshi; Jintao Jiang; David W. Shattuck; Lynne E. Bernstein; Hanna Damasio; Richard M. Leahy (NeuroImage, 2010)

Skull-stripping with deformable organisms. - Gautam Prasad; Anand A. Joshi; Paul M. Thompson; Arthur W. Toga; David W. Shattuck; Demetri Terzopoulos (ISBI, 2011)

Geodesic curvature flow on surfaces for automatic sulcal delineation. - Anand A. Joshi; David W. Shattuck; Hanna Damasio; Richard M. Leahy (ISBI, 2012)

Robust identification of partial-correlation based networks with applications to cortical thickness data. - David Wheland; Anand A. Joshi; Katie McMahon; Narelle K. Hansell; Nicholas G. Martin; Margaret J. Wright; Paul M. Thompson; David W. Shattuck; Richard M. Leahy (ISBI, 2012)

An Invariant Shape Representation Using the Anisotropic Helmholtz Equation. - Anand A. Joshi; Syed Ashrafulla; David W. Shattuck; Hanna Damasio; Richard M. Leahy (MICCAI (3), 2012)

A Method for Automated Cortical Surface Registration and Labeling. - Anand A. Joshi; David W. Shattuck; Richard M. Leahy (WBIR, 2012)

The Center for Computational Biology: resources, achievements, and challenges. - Arthur W. Toga; Ivo D. Dinov; Paul M. Thompson; Roger P. Woods; John D. Van Horn; David W. Shattuck; Douglas Stott Parker Jr. (J. Am. Medical Informatics Assoc., 2012)

Correcting inhomogeneity-induced distortion in FMRI using non-rigid registration. - Micah C. Chambers; Chitresh Bhushan; Justin P. Haldar; Richard M. Leahy; David W. Shattuck (ISBI, 2015)

Co-registration and distortion correction of diffusion and anatomical images based on inverse contrast normalization. - Chitresh Bhushan; Justin P. Haldar; Soyoung Choi; Anand A. Joshi; David W. Shattuck; Richard M. Leahy (NeuroImage, 2015)

A whole brain atlas with sub-parcellation of cortical gyri using resting fMRI. - Anand A. Joshi; Soyoung Choi; Gaurav Sonkar; Minqi Chong; Jorge Gonzalez-Martinez; Dileep Nair; David W. Shattuck; Hanna Damasio; Richard M. Leahy (Image Processing, 2017)

Individual parcellation of resting fMRI with a group functional connectivity prior. - Minqi Chong; Chitresh Bhushan; Anand A. Joshi; Soyoung Choi; Justin P. Haldar; David W. Shattuck; R. Nathan Spreng; Richard M. Leahy (NeuroImage, 2017)

Voting-based segmentation of overlapping nuclei in clarity images. - Benjamin Quachtran; Luis de la Torre Ubieta; Marianna Yusupova; Daniel H. Geschwind; David W. Shattuck (ISBI, 2018)

Using the Anisotropic Laplace Equation to Compute Cortical Thickness. - Anand A. Joshi; Chitresh Bhushan; Ronald Salloum; Jessica L. Wisnowski; David W. Shattuck; Richard M. Leahy (MICCAI (3), 2018)

Mouse brain extraction using 2-Stage CNNs. - Yeun Kim; Evelyn Malamut; Cassandra E. Meyer; Allan MacKenzie-Graham; David W. Shattuck (Image Processing, 2022)