The Poset of Proper Divisibility. - Davide Bolognini; Antonio Macchia; Emanuele Ventura; Volkmar Welker (SIAM J. Discret. Math., 2017)

Binomial edge ideals of bipartite graphs. - Davide Bolognini; Antonio Macchia; Francesco Strazzanti (Eur. J. Comb., 2018)

Nano-GLADIATOR: real-time detection of copy number alterations from nanopore sequencing data. - Alberto Magi; Davide Bolognini; Niccoló Bartalucci; Alessandra Mingrino; Roberto Semeraro; Luna Giovannini; Stefania Bonifacio; Daniela Parrini; Elisabetta Pelo; Francesco Mannelli; Paola Guglielmelli; Alessandro Maria Vannucchi (Bioinform., 2019)

VISOR: a versatile haplotype-aware structural variant simulator for short- and long-read sequencing. - Davide Bolognini; Ashley D. Sanders; Jan O. Korbel; Alberto Magi; Vladimir Benes; Tobias Rausch (Bioinform., 2020)

Non-ridge-chordal complexes whose clique complex has shellable Alexander dual. - Bruno Benedetti; Davide Bolognini (J. Comb. Theory A, 2021)

A Calibration-Free Astrometric Clinometer for Static Monitoring. - Massimiliano Chersich; Davide Bolognini; Davide Curone; Filippo Dacarro; Roberto Devoti (ASITA, 2022)

A combinatorial characterization of S2 binomial edge ideals. - Davide Bolognini; Antonio Macchia; Giancarlo Rinaldo; Francesco Strazzanti (Eur. J. Comb., 2025)