ESGq: Alternative Splicing Events Quantification across Conditions based on Event Splicing Graphs. - Davide Cozzi; Paola Bonizzoni; Luca Denti (ITAT, 2023)

Data Structures for SMEM-Finding in the PBWT. - Paola Bonizzoni; Christina Boucher 001; Davide Cozzi; Travis Gagie; Dominik Köppl; Massimiliano Rossi 001 (SPIRE, 2023)

μ- PBWT: a lightweight r-indexing of the PBWT for storing and querying UK Biobank data. - Davide Cozzi; Massimiliano Rossi 001; Simone Rubinacci; Travis Gagie; Dominik Köppl; Christina Boucher 001; Paola Bonizzoni (Bioinform., 2023)

Solving the Minimal Positional Substring Cover Problem in Sublinear Space. - Paola Bonizzoni; Christina Boucher 001; Davide Cozzi; Travis Gagie; Yuri Pirola (CPM, 2024)

Differential quantification of alternative splicing events on spliced pangenome graphs. - Simone Ciccolella; Davide Cozzi; Gianluca Della Vedova; Stephen Njuguna Kuria; Paola Bonizzoni; Luca Denti (PLoS Comput. Biol., 2024)

muPBWT k-SMEM. - Davide Cozzi (DROPS Artifacts, 2024)

Phasing Data from Genotype Queries via the μ-PBWT. - Davide Cozzi; Paola Bonizzoni; Christina Boucher 001; Ben Langmead; Yuri Pirola (The Expanding World of Compressed Data, 2025)

Pangenome Graph Indexing via the Multidollar-BWT. - Davide Cozzi; Brian Riccardi; Luca Denti; Simone Ciccolella; Kunihiko Sadakane; Paola Bonizzoni (SEA, 2025)