NemaFootPrinter: a web based software for the identification of conserved non-coding genome sequence regions between C. elegans and C. briggsae. - Davide Rambaldi; Alessandro Guffanti; Paolo Morandi; Giuseppe Cassata (BMC Bioinform., 2005)

Splicy: a web-based tool for the prediction of possible alternative splicing events from Affymetrix probeset data. - Davide Rambaldi; Barbara Felice; Viviane Praz; Philipp Bucher; Davide Cittaro; Alessandro Guffanti (BMC Bioinform., 2007)

FancyGene: dynamic visualization of gene structures and protein domain architectures on genomic loci. - Davide Rambaldi; Francesca D. Ciccarelli (Bioinform., 2009)

flowFit: a Bioconductor package to estimate proliferation in cell-tracking dye studies. - Davide Rambaldi; Salvatore Pece; Pier Paolo Di Fiore (Bioinform., 2014)

The BioMart community portal: an innovative alternative to large, centralized data repositories. - Damian Smedley; Syed Haider; Steffen Durinck; Luca Pandini; Paolo Provero; James E. Allen; Olivier Arnaiz; Mohammad Hamza Awedh; Richard A. Baldock; Giulia Barbiera; Philippe Bardou; Tim Beck; et al. (Nucleic Acids Res., 2015)