Remote Homology Detection of Protein Sequences. - Matteo Comin; Davide Verzotto (Structure Discovery in Biology: Motifs, Networks & Phylogenies, 2010)

Classification of protein sequences by means of irredundant patterns. - Matteo Comin; Davide Verzotto (BMC Bioinform., 2010)

The Irredundant Class Method for Remote Homology Detection of Protein Sequences. - Matteo Comin; Davide Verzotto (J. Comput. Biol., 2011)

Whole-Genome Phylogeny by Virtue of Unic Subwords. - Matteo Comin; Davide Verzotto (DEXA Workshops, 2012)

Alignment-free phylogeny of whole genomes using underlying subwords. - Matteo Comin; Davide Verzotto (Algorithms Mol. Biol., 2012)

Advanced computational methods for massive biological sequence analysis. - Davide Verzotto (2012)

Reducing the Space of Degenerate Patterns in Protein Remote Homology Detection. - Matteo Comin; Davide Verzotto (DEXA Workshops, 2013)

Filtering Degenerate Patterns with Application to Protein Sequence Analysis. - Matteo Comin; Davide Verzotto (Algorithms, 2013)

Beyond Fixed-Resolution Alignment-Free Measures for Mammalian Enhancers Sequence Comparison. - Matteo Comin; Davide Verzotto (IEEE ACM Trans. Comput. Biol. Bioinform., 2014)

The Colored Longest Common Prefix Array Computed via Sequential Scans. - Fabio Garofalo; Giovanna Rosone; Marinella Sciortino; Davide Verzotto (SPIRE, 2018)

Theoretical and Practical Analyses in Metagenomic Sequence Classification. - Hend Amraoui; Mourad Elloumi; Francesco Marcelloni; Faouzi Mhamdi; Davide Verzotto (DEXA Workshops, 2019)